Hi! Everyone,
Say this file1
--------------
line 1 51610183 420001010 0010CTCTLEDPPOO 2151610183
line 2 2151610183 420001010 0030A2TH2
line 3 2151610183 420001010 0040A2TH3
line 4 2151610183 420001010 ... (0 Replies)
I'll try explain this as best I can. Let me know if it is not clear.
I have large text files that contain data as such:
143593502 09-08-20 09:02:13 xxxxxxxxxxx xxxxxxxxxxx 09-08-20 09:02:11 N line 1 test
line 2 test
line 3 test
143593503 09-08-20 09:02:13... (3 Replies)
Hi,
I have a file such as:
---
>contig00001 length=35524 numreads=2944
gACGCCGCGCGCCGCGGCCAGGGCTGGCCCA
CAGGCCGCGCGGCGTCGGCTGGCTGAG
>contig00002 length=4242 numreads=43423
ATGCCGAAGGTCCGCCTGGGGCTGG
CGCCGGGAGCATGTAGCG
---
I would like to concatenate the lines not starting with ">"... (9 Replies)
Hi ,
I'm looking for a way to merge two lines only for a given pattern / condition.
Input :
abcd/dad + -49.201 2.09 -49.5 34 ewrew rewtre *
fdsgfds/dsgf/sdfdsfasdd +
-4.30 0.62 -49.5 45 sdfdsf cvbbv *
sdfds/retret/asdsaddsa +
... (1 Reply)
Hi, just tried some script, awk, sed for the last 2 hours and now need help.
Let's say I have a huge file of 800,000 lines like this :
It's a tedious job to look through it, I'd like to remove those useless lines in it as there's a few thousands :
Or to be even more precise :
if line1 =... (6 Replies)
How to concatenate lines with specific pattern?
I have data dumped from a table into text file. In some occurrence the data row is split into two rows.
Example:
12345678|Global Test|Global Test Task|My Request|Date|Date|Date|1|1|
12345679|Global Test2|Global Test Task2|My... (8 Replies)
Hi ,
I want to insert data into a new file after grepping specific pattern . for more info please read following
for example:
abc=12345678902222
def=45678904444
-------
-------
INAVLID ABC
I want to "INAVLID ABC" grep above pattern from multiple files and want to write abc value and ... (3 Replies)
Hi,
I need to delete all lines in the file using vi editor which start with word aternqaco.
Please assist.
aternqaco.__oracle_base='/amdbqa01/app/oracle'#ORACLE_BASE set from environment
aternqa.__oracle_base='/amdbqa01/app/oracle'#ORACLE_BASE set from environment... (3 Replies)
Gents,
I am trying to delete all lines which start with "H" character, but keeping the fist header. Example In the input file I will delete all lines starting from line 8 which contents character "H" to the end of the file.
I try
sed '8,10000{/^H/d;}' file
But as don't know the end... (1 Reply)
In the below file I am trying to grep or similar, all lines where only AF= is less than 0.4.. Thank you :).
grep
grep "AF=" ,+ .4 file
file
12 112036782 . T C 34.0248 PASS ... (3 Replies)
Discussion started by: cmccabe
3 Replies
LEARN ABOUT PHP
genders_parse
GENDERS_PARSE(3) LIBGENDERS GENDERS_PARSE(3)NAME
genders_parse - determine errors with a genders file
SYNOPSIS
#include <genders.h>
int genders_parse(genders_t handle, const char *filename, FILE *stream);
DESCRIPTION
genders_parse() parses the genders file indicated by filename and outputs information to stream about parse errors in the genders file. If
filename is NULL, the default genders file will be checked. If stream is NULL, information will be output to standard error.
RETURN VALUES
On success, the number of parse errors discovered is returned. If there are no errors, 0 is returned. On error, -1 is returned, and an
error code is returned in handle. The error code can be retrieved via genders_errnum(3) , and a description of the error code can be
retrieved via genders_strerror(3). Error codes are defined in genders.h.
ERRORS
GENDERS_ERR_NULLHANDLE
The handle parameter is NULL. The genders handle must be created with genders_handle_create(3).
GENDERS_ERR_OPEN
The genders file indicated by filename cannot be opened for reading.
GENDERS_ERR_OVERFLOW
A line in the genders database exceeds the maximum allowed length.
GENDERS_ERR_MAGIC
handle has an incorrect magic number. handle does not point to a genders handle or handle has been destroyed by genders_han-
dle_destroy(3).
FILES
/usr/include/genders.h
SEE ALSO libgenders(3), genders_handle_create(3), genders_errnum(3), genders_strerror(3)LLNL August 2003 GENDERS_PARSE(3)