Hi--
I'm trying to figure out how to use cat more wisely. I have the following command, which works, but I'd like to understand how to get it to work more clearly and efficiently.
cat 'my file.001' 'my file.002' 'my file.003' 'my file.004' 'my file.005' 'my file.006' 'my file.007' 'my... (6 Replies)
Hi all,
I have a directory with many subdirectories each named like so: KOG0001, KOG0002, ...KOG9999.
Each of these subdirectories contain a variable number two kinds of files (nuc and prot) named like so: Capitella_sp_nuc_hits.fasta (nuc) and Capitella_sp_prot_hits.fasta (prot). The... (2 Replies)
Hopefully the title summarized what I need help with. I have multiple files that I would like to concatenate in bash.
ie:
cat file1 file2 file3 > bigfile
except I do not want to include the first line from each file (). Any help? Thanks. (6 Replies)
Hi all,
please help me construct the command. i want to loop through all files named bam* and bed*. My awk works for a particular pair but there are too many pairs to do manually.
I have generated multiple files in a folder in a given pattern. The files are named like
bam_fixed1.bam... (2 Replies)
Hi all,
Please guide. It has to do with parsing the input file names.
I have a fairly large number of files, I want to do some operations on them in a pairwise fashion (every file has a pair).
The names are in the following pattern, with the pairs of files named with _1 and _2 , the... (4 Replies)
I have a folder that contains a number of files with file names as follows:
XX.YYYY..ZZZ.2014.001.000000
XX.YYYY..ZZZ.2014.001.000400
XX.YYYY..ZZZ.2014.001.000800
XX.YYYY..ZZZ.2014.001.001200
XX.YYYY..ZZZ.2014.001.001600
.....
XX.YYYY..ZZZ.2014.002.000000
XX.YYYY..ZZZ.2014.002.000400... (8 Replies)
Hi,
Is there any way to do a cat * where it shows the name of each file in the process? Similar to what more does below?
$ more ?.sql
::::::::::::::
1.sql
::::::::::::::
set linesize 200
select db_unique_name,
cast(
from_tz(
cast(... (5 Replies)
Hi,
I would like to batch concatenate files by pairs. I have quite a few of them so I would not like to do that pair by pair separately.
the names of the file is of the type:
file1.fastq
newfile1_new.fastq
file2.fastq
newfile2_new.fastq
and so on...
I would like to concatenate file1... (2 Replies)
I will like to merge several files using 'cat', but I observe the output is not consistent. the merge begins at the last line of the first file.
file1.txt:
1234
1234
1234
file2.txt:
aaaa
bbbb
cccc
dddd
cat file1.txt file2.txt > file3.txt
file3.txt:
1234
1234
1234aaaa
bbbb
cccc... (13 Replies)
Discussion started by: geomarine
13 Replies
LEARN ABOUT SUNOS
gzexe
GZEXE(1) General Commands Manual GZEXE(1)NAME
gzexe - compress executable files in place
SYNOPSIS
gzexe [ name ... ]
DESCRIPTION
The gzexe utility allows you to compress executables in place and have them automatically uncompress and execute when you run them (at a
penalty in performance). For example if you execute ``gzexe /bin/cat'' it will create the following two files:
-r-xr-xr-x 1 root bin 9644 Feb 11 11:16 /bin/cat
-r-xr-xr-x 1 bin bin 24576 Nov 23 13:21 /bin/cat~
/bin/cat~ is the original file and /bin/cat is the self-uncompressing executable file. You can remove /bin/cat~ once you are sure that
/bin/cat works properly.
This utility is most useful on systems with very small disks.
OPTIONS -d Decompress the given executables instead of compressing them.
SEE ALSO gzip(1), gznew(1), gzmore(1), gzcmp(1), gzforce(1)CAVEATS
The compressed executable is a shell script. This may create some security holes. In particular, the compressed executable relies on the
PATH environment variable to find gzip and some other utilities (tail, chmod, ln, sleep).
BUGS
gzexe attempts to retain the original file attributes on the compressed executable, but you may have to fix them manually in some cases,
using chmod or chown.
ATTRIBUTES
See attributes(5) for descriptions of the following attributes:
+--------------------+-----------------+
| ATTRIBUTE TYPE | ATTRIBUTE VALUE |
+--------------------+-----------------+
|Availability | SUNWgzip |
+--------------------+-----------------+
|Interface Stability | External |
+--------------------+-----------------+
NOTES
Source for gzip is available in the SUNWgzipS package.
GZEXE(1)