Hi,
I am new to unix. Is their a way to pass the output of the line below to a variable var1.
ls -1t | head -1.
I am trying something like var1=ls -1t | head -1, but I get error.
Situation is: I get file everyday through FTP in my unix box. I have to write a script that picks up first... (1 Reply)
I have a shell script which does the encryption of a file where i am passing the file name as a command line argument,but later on the script waits on the screen to enter Y or N
what is the command i should be using on the shell script
#!/bin/bash -x
outfilename=file.out
echo... (8 Replies)
Hi all
I have got a file digits.data containing the following data
1 3 4
2 4 9
7 3 1
7 3 10
I am writing a script that will pass an argument from C-shell to nawk command. But it seems the values in the nawk comman does not get set. the program does not print no values out. Here is the... (1 Reply)
Hi,
I am facing a problem to pass command line arguments that looks like
<script name> aa bb "cc" dd "ee"
I want to pass all 5 elements include the " (brackets). when I print the @ARGV the " disappear. I hope I explain myself
Regards,
Ziv (4 Replies)
Hi,
I have a very small requirement where i need to pass command output as an argument while invoking the shell script..
I need to call like this
sh testscript.sh ' ls -t Appl*and*abc* | head -n 1'
This will list one file name as ana argument..
I will be using "$1" in the shell... (2 Replies)
Hi,
I'm trying to pass the variable in the find command like below
a=log.20111114
find /apps/file3_logs/env3/ -name '$a' -exec ls -lrt {} \;
but it's not working
thanks in advance.
Regards
Thelak (3 Replies)
Can we pass an argument to cut command as below
Suppose cut command is used in for or while loop and we need to pass the incremental counter
cut -f$i
Here $i is an argument.
Like wise it has to come
cut -f1
cut -f2
Where i=1,2,3,.... (1 Reply)
Hi.
I'm trying to do a "simple" thing.
grep -rls grepped_exp path | xgs
where xgs is an alias to something like:
xargs gvim -o -c ":g/grepped_exp"
now the problem is that I want to pass the "grepped_exp" to the piped alias.
I was able to do something like what I want without the... (4 Replies)
Hi All,
I am having command to run which will take argument as input file. Right now we are creating the input file by cat and executing the command
ftptransfer -i input file
cat >input file
file1
file2
cntrl +d
Is there a way I can do that in a single command like
... (1 Reply)
Discussion started by: arunkumar_mca
1 Replies
LEARN ABOUT DEBIAN
trna2sap
TRNA2SAP(1) NCBI Tools User's Manual TRNA2SAP(1)NAME
trna2sap - convert tRNAscan-SE output to an ASN.1 Seq-annot object
SYNOPSIS
trna2sap [-] [-a] [-c str] [-f str] [-i filename] [-j] [-m str] [-n str] [-o filename] [-p dir] [-r dir] [-s] [-t str] [-u] [-x str]
DESCRIPTION
trna2sap reads a text file produced by tRNAscan-SE and produces a corresponding ASN.1 Seq-annot in the format understood by other NCBI
tools.
OPTIONS
A summary of options is included below.
- Print usage message
-a Add tRNAscan-SE citation
-c str Comment
-f str Substring Filter
-i filename
Single Input file (standard input by default)
-j Just produce a five-column feature table, a la trna2tbl(1).
-m str ReMark
-n str Annotation Name (normally "tRNA").
-o filename
Single Output file (standard output by default)
-p dir Path to files
-r dir Path for Results
-s Ignore Pseudo tRNAs
-t str Annotation Title (normally "tRNAscan-SE").
-u Ignore Undetermined tRNAs
-x str File selection suffix with -p (.trna by default).
AUTHOR
The National Center for Biotechnology Information.
SEE ALSO sequin(1), tbl2asn(1), trna2tbl(1).
NCBI 2006-01-11 TRNA2SAP(1)