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Full Discussion: Date reformatting
Top Forums UNIX for Dummies Questions & Answers Date reformatting Post 302537769 by figaro on Sunday 10th of July 2011 04:31:13 AM
Old 07-10-2011
Date reformatting

I currently have the following file containing sample values for a number of dates:
Code:
Loc1 04 Jan 2007 0.95 0.9532
Loc1 05 Jan 2007 0.95 0.9513
Loc1 06 Jan 2007 0.95 0.9535

This continues for all months of the year and spans across several years.

I am trying to reformat the dates so that they become mysql-friendly, ie to yyyy-mm-dd

Firstly, is there an easier way to translate the months than this?
Code:
sed -i '' -e 's/ Jan /-01-/' file.dat
sed -i '' -e 's/ Feb /-02-/' file.dat
sed -i '' -e 's/ Mar /-03-/' file.dat
sed -i '' -e 's/ Apr /-04-/' file.dat
sed -i '' -e 's/ May /-05-/' file.dat
sed -i '' -e 's/ Jun /-06-/' file.dat
sed -i '' -e 's/ Jul /-07-/' file.dat
sed -i '' -e 's/ Aug /-08-/' file.dat
sed -i '' -e 's/ Sep /-09-/' file.dat
sed -i '' -e 's/ Oct /-10-/' file.dat
sed -i '' -e 's/ Nov /-11-/' file.dat
sed -i '' -e 's/ Dec /-12-/' file.dat

Secondly, from there I reformat the dates from dd-mm-yyyy to yyyy-mm-dd as follows:
Code:
sed -i '' -e "s#\(..\) \(..\) \(....\)#\3-\2-\1#" file.dat

Perhaps all commands can be combined into one, preferably using sed or tr?

Thank you in advance
 

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UNKNOWN(1)						      General Commands Manual							UNKNOWN(1)

NAME
unknown - identify possible genotypes for unknowns SYNOPSIS
A program to rapidly identify which genotypes are possible for individuals typed as unknowns in the input pedigree. unknown [ -cl ] DESCRIPTION
unknown infers possible genotypes and mating combinations for parents with unknown genotypes for ilink(1), mlink(1) and linkmap(1). OPTIONS
-c Use conditional allele frequencies. -l Choose a good set of loop breakers automatically. RETURN VALUE
0 Successful completion ERRORS
10 File not found 255 Failure EXAMPLES
Normally, unknown(1) is run immediately prior to its sister programs, ilink(1), mlink(1) and linkmap(1), like this: unknown mlink FILES
unknown(1) reads the two files pedfile.dat and datafile.dat as its own input and produces various temporary files that are used as input to the next program. These temporary files are ipedfile.dat, upedfile.dat, speedfile.dat and newspeedfile.dat. NOTES
unknown(1) is part of the FASTLINK package, which is a re-implementation of the LINKAGE suite of computer tools that help investigate genetic linkage as first proposed G.M. Lathrop, J.M. Lalouel, C. Julier, and J. Ott. AUTHORS
Dylan Cooper, Alejandro Schaffer, and Tony Schurtz based on work originally by Jurg Ott, Ph.D, et. al. This manual page was written by Elizabeth Barham <lizzy@soggytrousers.net> for the Debian GNU/Linux system (but may be used by others). WORD-WIDE-WEB http://www.ncbi.nlm.nih.gov/CBBResearch/Schaffer/fastlink.html SEE ALSO
ilink(1), linkmap(1), lodscore(1), mlink(1). April 15, 2003 UNKNOWN(1)
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