When I execute following shell script I am getting the following error
syntax error at line 50 : `<<' unmatched
What am I doing wrong :confused:
Script begins here
----------------
MPAN_FILE=$1
exec 3<$MPAN_FILE ... (2 Replies)
Does anyone see anything wrong with this.
#getInfraFiles()
#{
# cd Infra/$DAY
# rm *
# /usr/bin/ftp -i -n $LINE << cmd
# user "$USER" "$PASSWD"
# cd $INFRAPATH
# binary
# mget *
# bye
#}
besides that its commented out (4 Replies)
Hello,
I have a simple script such as
-----------------------------
#! /bin/sh
YEAR=`date -u +%Y`;
MONTH=`date -u +%m`;
DAY=`date -u +%d`;
DATE=$MONTH$DAY$YEAR
LOGFILES=auditTrail-$DATE
LOGMATCH=$LOGFILES\*
ARGUM=''
# find all files and write them to a file
find . -name... (7 Replies)
I really just mess around in UNIX, for the most part, when I want to get something done. I can usually piece things together by searching for brief how-to's on Google, but the syntax errors in my following .sh file are really confusing me. I've got lots of programming experience in other places, so... (7 Replies)
when user select option 2 nothing happen.for testing purpose I put
echo command but is not executing .
basically when user prompt for option 2,I want to get list of database name from user separeted by space (TEST DEVL)
and put into the file seprated by new line
TEST
DEVL
after that stay on... (1 Reply)
I am working on a simple login ID check shell script that should prompt for a user ID then check to see if this user is logged on. Trying to get the hang of this stuff so I am thinking of my own little projects.
#! /bin/sh
echo "please enter a user name"
read user
if user=$user
then... (3 Replies)
Hi ! all I am just trying to check range in my datafile
pls tell me why its resulting wrong
admin@IEEE:~/Desktop$ cat test.txt
0 28.4
5 28.4
10 28.4
15 28.5
20 28.5
25 28.6
30 28.6
35 28.7
40 28.7
45 28.7
50 28.8
55 28.8
60 28.8
65 28.1... (2 Replies)
Discussion started by: Akshay Hegde
2 Replies
LEARN ABOUT DEBIAN
bio::treeio::svggraph
Bio::TreeIO::svggraph(3pm) User Contributed Perl Documentation Bio::TreeIO::svggraph(3pm)NAME
Bio::TreeIO::svggraph - A simple output format that converts a Tree object to an SVG output
SYNOPSIS
use Bio::TreeIO;
my $in = Bio::TreeIO->new(-file => 'input', -format => 'newick');
my $out = Bio::TreeIO->new(-file => '>output', -format => 'svggraph');
while( my $tree = $in->next_tree ) {
my $svg_xml = $out->write_tree($tree);
}
DESCRIPTION
This outputs a tree as an SVG graphic using the SVG::Graph API
FEEDBACK
Mailing Lists
User feedback is an integral part of the evolution of this and other Bioperl modules. Send your comments and suggestions preferably to the
Bioperl mailing list. Your participation is much appreciated.
bioperl-l@bioperl.org - General discussion
http://bioperl.org/wiki/Mailing_lists - About the mailing lists
Support
Please direct usage questions or support issues to the mailing list:
bioperl-l@bioperl.org
rather than to the module maintainer directly. Many experienced and reponsive experts will be able look at the problem and quickly address
it. Please include a thorough description of the problem with code and data examples if at all possible.
Reporting Bugs
Report bugs to the Bioperl bug tracking system to help us keep track of the bugs and their resolution. Bug reports can be submitted via the
web:
https://redmine.open-bio.org/projects/bioperl/
AUTHOR - Brian OConnor
Email brian.oconnor-at-excite.com
CONTRIBUTORS
Allen Day Guillaume Rousse, Guillaume-dot-Rousse-at-inria-dot-fr
APPENDIX
The rest of the documentation details each of the object methods. Internal methods are usually preceded with a _
new
Title : new
Usage : my $obj = Bio::TreeIO::svggraph->new();
Function: Builds a new Bio::TreeIO::svggraph object
Returns : Bio::TreeIO::svggraph
Args :-width => image width (default 1600)
-height => image height (default 1000)
-margin => margin (default 30)
-stroke => stroke color (default 'black')
-stroke_width=> stroke width (default 2)
-font_size=> font size (default '10px')
-nomalize => undef or 'log' (default is undef)
write_tree
Title : write_tree
Usage : $treeio->write_tree($tree);
Function: Write a tree out to data stream in newick/phylip format
Returns : none
Args : Bio::Tree::TreeI object
decorateRoot
Title : _decorateRoot
Usage : internal methods
Function:
Example :
Returns :
Args :
next_tree
Title : next_tree
Usage :
Function: Sorry not possible with this format
Returns : none
Args : none
perl v5.14.2 2012-03-02 Bio::TreeIO::svggraph(3pm)