I'm currently digging for a way to append a line to a text file where each line begins with the word "setmqaut". This is a continuation of my IBM MQSeries backup script I'm working on to make my life a little easier.
What I would like to do is have each line that looks like this:
setmqaut -m... (4 Replies)
Hello,
I am searching all over the place for this, just not finding anything solid :(
I want to do be able to access the groups that are matched with grep (either with extended regex, or perl compatible regex). For instance:
echo "abcd" | egrep "a(b(c(d)))"
Of course this returns... (1 Reply)
Hello,
I looking to use grep to return a string with exactly n matches.
I'm building off this:
ls -aLl /bin | grep '^.\{9\}x' | tr -s ' '
-rwxr-xr-x 1 root root 632816 Nov 25 2008 vi
-rwxr-xr-x 1 root root 632816 Nov 25 2008 view
-rwxr-xr-x 1 root root 16008 May 25 2008... (7 Replies)
Hi all!
I've faced with very unintelligible error using find/grep like this:
root@v29221:~# find /var/www/igor/data/www/lestnitsa.ru | grep u28507I get nothing as a result, but:
root@v29221:~# grep u28507 /var/www/igor/data/www/lestnitsa.ru/_var.inc
$db_name = 'u28507';... (2 Replies)
I’m trying to modify someone perl script to fix a bug. The piece of code checks that the zone name you want to add is unique. However, when the code runs, it finds a partial match using grep, and decides it already exists, so the “create” command exits.
$cstatus = `${ZADM} list -vic | grep... (3 Replies)
Hi All,
I'm trying to grep for 3 patterns in a string of gibberish. It so happens that each line is appended by a date/time stamp and i was able to figure out how to extract only the datetime.
here is the string..
i have to display
tinker tailor soldier spy
Please can some help... (2 Replies)
Hi guys,
As the title, I want to take out the lines in file2 if the TCONS_* matches that in file1. Then put the lines in a file3. The TCONS numbers ranges from TCONS_00000024 to TCONS_00381684. Those numbers are continuous in file2, not in file1. Below is just some lines of file1 and file2
... (4 Replies)
Hi all...
Can somebody pls help me with this...
I have a directory (dir1) which has many subdirectories(vr001,vr002,vr003..) with each subdir containing similar text file(say ras.txt).
I have another directory(dir2) which has again got some subdir(vr001c,vr002c,vr003c..) with each subdir... (0 Replies)
Dear All,
Here is my input
TAACGCACTTGCGGCCCCGGGATAAAAAAAAAAAAAAAAAAAAATGGATT
NAGAGGGACGGCCGGGGGCATAAAAAAAAAAAAAAAAAAAAAGGGATTTC
NGGGTTTTAAGCAGGAGGTGTCAAAAAAAAAAAAAAAAAAAAAGGGATTT
NTGGAACCTGGCGCTAGACCAAAAAAAAAAAAAAAAAAAATGGATTTTTG
ATACTTACCTGGCAGGGGAGATACCATGATCAATAAAAAAAAAAAAAAAA... (3 Replies)
Hi,
I know that
echo "bob alice robert alice" | awk '{print index($0,"alice")}'
5Will output the index of the first alice match, is there any way to get the index of all matches?, eg:
echo "bob alice robert alice" | awk 'unknown magic'
5:18Thanks for your time. (6 Replies)
Discussion started by: chilicuil
6 Replies
LEARN ABOUT DEBIAN
bio::biblio::bookarticle
Bio::Biblio::BookArticle(3pm) User Contributed Perl Documentation Bio::Biblio::BookArticle(3pm)NAME
Bio::Biblio::BookArticle - Representation of a book article
SYNOPSIS
$obj = Bio::Biblio::BookArticle->new(-identifier => '123abc',
-book => Bio::Biblio::Book->new());
#--- OR ---
$obj = Bio::Biblio::BookArticle->new();
$obj->book (Bio::Biblio::Book->new());
DESCRIPTION
A storage object for a book article. See its place in the class hierarchy in
http://www.ebi.ac.uk/~senger/openbqs/images/bibobjects_perl.gif
Attributes
The following attributes are specific to this class (however, you can also set and get all attributes defined in the parent classes):
book type: Bio::Biblio::Book
SEE ALSO
o OpenBQS home page: http://www.ebi.ac.uk/~senger/openbqs/
o Comments to the Perl client: http://www.ebi.ac.uk/~senger/openbqs/Client_perl.html
FEEDBACK
Mailing Lists
User feedback is an integral part of the evolution of this and other Bioperl modules. Send your comments and suggestions preferably to the
Bioperl mailing list. Your participation is much appreciated.
bioperl-l@bioperl.org - General discussion
http://bioperl.org/wiki/Mailing_lists - About the mailing lists
Support
Please direct usage questions or support issues to the mailing list:
bioperl-l@bioperl.org
rather than to the module maintainer directly. Many experienced and reponsive experts will be able look at the problem and quickly address
it. Please include a thorough description of the problem with code and data examples if at all possible.
Reporting Bugs
Report bugs to the Bioperl bug tracking system to help us keep track of the bugs and their resolution. Bug reports can be submitted via the
web:
https://redmine.open-bio.org/projects/bioperl/
AUTHORS
Heikki Lehvaslaiho (heikki-at-bioperl-dot-org), Martin Senger (senger@ebi.ac.uk)
COPYRIGHT
Copyright (c) 2002 European Bioinformatics Institute. All Rights Reserved.
This module is free software; you can redistribute it and/or modify it under the same terms as Perl itself.
DISCLAIMER
This software is provided "as is" without warranty of any kind.
perl v5.14.2 2012-03-02 Bio::Biblio::BookArticle(3pm)