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Full Discussion: Extract a block of text??
Top Forums Shell Programming and Scripting Extract a block of text?? Post 302490760 by marcozd on Tuesday 25th of January 2011 03:40:59 PM
Old 01-25-2011
Quote:
Originally Posted by Perderabo
I'm not sure what the problem is. I did leave in a debug statement and I edited my post to remove it. I piped the scipt though head to cut down on the output which is why only part of your data shows. You should not use head. Run the script yourself without the head, you will see all of the data.

If you must have the perl script embedded in another language it would help if you would reveal which language. Guessing bash... here you go. But note that I'm piping through head again... you still see only part of your data.
Code:
$ cat form2
#! /bin/bash
echo I am a bash script
exec < datafile
#
#
perl -wn -e '
BEGIN {$state="skip";};
/^-+$/           and do {$state="proc"; print; next LINE};
/EQUIL/          and do {$state="copy";};
$state eq "skip" and do {next LINE;};
/^\s*$/          and do {last LINE;};
$state eq "copy" and do {print ; next LINE;};
$state eq "proc" and do { printf "%-10s   %6s  %16s %16s %16s\n", split(" ", $_);};
'
#
exit 0
$ ./form2 | head
I am a bash script
***** EQUILIBRIUM GEOMETRY LOCATED *****
COORDINATES OF ALL ATOMS ARE (ANGS)
ATOM CHARGE X Y Z
------------------------------------------------------------
MOLYBDENUM     42.0      5.9067578125     5.0087332497    17.4699146400
SULFUR         16.0      7.9742837782     3.7588015097    17.3910898169
SULFUR         16.0      5.0973219622     3.0091611327    16.3724427108
SULFUR         16.0      3.8536412225     4.7600928861    18.7261323168
SULFUR         16.0      6.7241053728     5.6252659948    19.6631739883
$

Yes - I would need it as a bash script. Thanks for your help. I will let you know how it goes.

---------- Post updated at 03:40 PM ---------- Previous update was at 03:36 PM ----------

Quote:
Originally Posted by marcozd
Yes - I would need it as a bash script. Thanks for your help. I will let you know how it goes.
One other thing - where do I put my input file?

For previous scripts, I usually define a variable like $DAT.log for the name of the output file.

Then in the command line I put DAT=name_of_output_file ./shellscript.sh

Is this how it would work with your suggestion?
 

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RBASH(1)						      General Commands Manual							  RBASH(1)

NAME
rbash - restricted bash, see bash(1) RESTRICTED SHELL
If bash is started with the name rbash, or the -r option is supplied at invocation, the shell becomes restricted. A restricted shell is used to set up an environment more controlled than the standard shell. It behaves identically to bash with the exception that the follow- ing are disallowed or not performed: o changing directories with cd o setting or unsetting the values of SHELL, PATH, ENV, or BASH_ENV o specifying command names containing / o specifying a file name containing a / as an argument to the . builtin command o specifying a filename containing a slash as an argument to the -p option to the hash builtin command o importing function definitions from the shell environment at startup o parsing the value of SHELLOPTS from the shell environment at startup o redirecting output using the >, >|, <>, >&, &>, and >> redirection operators o using the exec builtin command to replace the shell with another command o adding or deleting builtin commands with the -f and -d options to the enable builtin command o using the enable builtin command to enable disabled shell builtins o specifying the -p option to the command builtin command o turning off restricted mode with set +r or set +o restricted. These restrictions are enforced after any startup files are read. When a command that is found to be a shell script is executed, rbash turns off any restrictions in the shell spawned to execute the script. SEE ALSO
bash(1) GNU Bash-4.0 2004 Apr 20 RBASH(1)
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