I am trying to compare two file and make changes where ever its different.
for example:
Contents of file1
IP=192.165.89.11
NM=255.255.0.0
GW=192.165.89.1
Contents of file2
IP=192.165.89.11
NM=255.255.255.255
GW=192.165.89.1
NOTE HERE THAT NM IS DIFFERENT
So i want the changes... (6 Replies)
How I can get the current make-file name in a make-file
So, if I run make with specified file:make -f target.mak
is it possible to have the 'target' inside of the that 'target.mak' from the file name? (2 Replies)
Hi
I have to create a windows batch file which will read an input file and remove "double quotes" from each line of the file.
For eg.If input file name is abcd.csv and contents is :
"asasd,123123,213213,asd"
"esfrf,dsfsdf,234324,sdfsdf"
Then the batch file should remove "" from the... (11 Replies)
Hi,
I would like to get the output of below command emailed to me in a windows2003 server.
"bpimagelist -hoursago 24 -U"
I will be using "blat" to email the output of this command.But not sure how the above command is called for in a batch file when executed.
Would appreciate if... (1 Reply)
Hello all,
I have a make question, and I was hoping somebody here might be able to point me in the right direction.
Here is my issue; I have a command-line tool that I use to run a conversion on an input XML file that results in an output binary file. However, this particular tool needs to... (1 Reply)
I have input data looks like this which is a part of a csv file
7,1265,76548,"0102:04"
8,1266,76545,"0112:04"
I need to make the output data should look like this and the output data will be part of text file:
7|1265000 |7654899 |A|
8|12660000 |76545999 |B|
The logic behind the... (6 Replies)
I am trying to use a batch file to automatically execute a bash script with no luck this far.
The batch script looks like this:
C:\Cygwin64\bin\bash test.sh
I have also tried this:
C:\Cygwin64\bin\bash "C:\Cygwin64\bin\test.sh"
Needless to say that the windows box has Cygwin... (7 Replies)
Let say I have a file with variables (Test1.txt)
In Test1.txt file, it consists of
Tom is a boy
Jim is a dog
In the other scripting file (RunTest1.sh), I have
#!/bin/ksh
filename = /directory/Test1.txt
cat $filename
for i in $filename
do
print $i
done
I managed to call... (1 Reply)
Discussion started by: TestKing
1 Replies
LEARN ABOUT DEBIAN
bp_sreformat
BP_SREFORMAT(1p) User Contributed Perl Documentation BP_SREFORMAT(1p)NAME
bpsreformat - convert sequence formats
DESCRIPTION
This script uses the SeqIO system that allows conversion of sequence formats either sequence data or multiple sequence alignment data. The
name comes from the fact that Sean Eddy's program sreformat (part of the HMMER pkg) already does this. Sean's program tries to guess the
input formats while in our code we currently require your to specify what the input and output formats are and if the data is from a
multiple sequence alignment or from straight sequence files.
Usage:
bpsreformat -if INFORMAT -of OUTFORMAT -i FILENAME -o output.FORMAT
-h/--help Print this help
-if/--informat Specify the input format
-of/--outformat Specify the output format
-i/--input Specify the input file name
(to pass in data on STDIN use minus sign as filename)
-o/--output Specify the output file name
(to pass data out on STDOUT use minus sign as filename)
--msa Specify this is multiple sequence alignment data
--special Will pass on special parameters to the AlignIO/SeqIO
object -- most of these are for Bio::AlignIO objects
Comma separated list of the following
nointerleaved -- for phylip,non-interleaved format
idlinebreak -- for phylip, makes it molphy format
percentages -- for clustalw, show % id per line
perl v5.14.2 2012-03-02 BP_SREFORMAT(1p)