Hi Friends,
Can any of you explain me about the below line of code?
mn_code=`env|grep "..mn"|awk -F"=" '{print $2}'`
Im not able to understand, what exactly it is doing :confused:
Any help would be useful for me.
Lokesha (4 Replies)
Hi,
I am trying to replace a value in a script with another value. I am performing a vi command from another script.
vi - ${conf_path}/CANCEL_CD_PART2.txt<<!
:%s/RANGE/${btch_range}/g
:wq
!
'RANGE' is the current value that the parm in the other script has (PARM1=RANGE), along with... (3 Replies)
Hi,
I have line in input file as below:
3G_CENTRAL;INDONESIA_(M)_TELKOMSEL;SPECIAL_WORLD_GRP_7_FA_2_TELKOMSEL
My expected output for line in the file must be :
"1-Radon1-cMOC_deg"|"LDIndex"|"3G_CENTRAL|INDONESIA_(M)_TELKOMSEL"|LAST|"SPECIAL_WORLD_GRP_7_FA_2_TELKOMSEL"
Can someone... (7 Replies)
Hi,
I have a task of "encrypting" a file by replacing the numbers with another set of numbers. Sort of swapping the values, say:
1 = 5
2 = 8
3 = 7
4 = 1
5 = 9 and so on..
so if i have 12345, my output should be 58719.
problem is i get 98719 since after swapping 1 to 5, my sed... (7 Replies)
How to use "mailx" command to do e-mail reading the input file containing email address, where column 1 has name and column 2 containing “To” e-mail address
and column 3 contains “cc” e-mail address to include with same email.
Sample input file, email.txt
Below is an sample code where... (2 Replies)
Hello.
System : opensuse leap 42.3
I have a bash script that build a text file.
I would like the last command doing :
print_cmd -o page-left=43 -o page-right=22 -o page-top=28 -o page-bottom=43 -o font=LatinModernMono12:regular:9 some_file.txt
where :
print_cmd ::= some printing... (1 Reply)
Hi 2 all,
i have had AIX 7.2
:/# /usr/IBMAHS/bin/apachectl -v
Server version: Apache/2.4.12 (Unix)
Server built: May 25 2015 04:58:27
:/#:/# /usr/IBMAHS/bin/apachectl -M
Loaded Modules:
core_module (static)
so_module (static)
http_module (static)
mpm_worker_module (static)
... (3 Replies)
Discussion started by: penchev
3 Replies
LEARN ABOUT DEBIAN
blastclust
BLASTCLUST(1) NCBI Tools User's Manual BLASTCLUST(1)NAME
blastclust - BLAST score-based single-linkage clustering
SYNOPSIS
blastclust [-] [-C] [-L X] [-S X] [-W N] [-a N] [-b F] [-c filename] [-d filename] [-e F] [-i filename] [-l filename] [-o filename] [-p F]
[-r filename] [-s filename] [-v [filename]]
DESCRIPTION
blastclust automatically and systematically clusters protein or DNA sequences based on pairwise matches found using the BLAST algorithm in
case of proteins or Mega BLAST algorithm for DNA. In the latter case a single Mega BLAST search is performed for all the sequences combined
against a database created from the same sequences. blastclust finds pairs of sequences that have statistically significant matches and
clusters them using single-linkage clustering.
OPTIONS
A summary of options is included below.
- Print usage message
-C Complete unfinished clustering
-L X Length coverage threshold (default = 0.9)
-S X Score coverage threshold (bit score / length if < 3.0, percentage of identities otherwise; default = 1.75)
-W N Use words of size N (length of best perfect match; zero invokes default behavior: 3 for proteins, 32 for nucleotides)
-a N Number of CPU's to use (default = 1)
-b F Do not require coverage on both neighbours
-c filename
Read advanced options from configuration file filename
-d filename
Input as a database
-e F Disable id parsing in database formatting
-i filename
FASTA input file (program will format the database and remove files in the end; default = stdin)
-l filename
Restrict reclustering to id list in filename
-o filename
Output file for list of clusters (default = stdout)
-p F Input is nucleotides, not proteins.
-r filename
Restore neighbors for reclustering from filename
-s filename
Save all neighbours to filename
-v [filename]
Print verbose progress messages (to filename)
AUTHOR
The National Center for Biotechnology Information.
SEE ALSO blast(1), formatdb(1), /usr/share/doc/blast2/blastclust.html, <http://www.ncbi.nlm.nih.gov/BLAST/>
NCBI 2004-06-25 BLASTCLUST(1)