I've got a loop in which I am processing a list of values gotten through a file with read command.
It seems that instead of processing the lines (values) one by one, I process them all together.
the input file is:
The code is:
and produces the same output as the input file, meaning that the last 'else' statement is validated each time. By testing I have seen that it takes the whole file (all lines) in each iteration.
I have also tested this code:
which returns
which propably is due to checking with the 1st value each time.
I have two files which I would like to compare and then manipulate in a way.
File1:
pictures.txt 1.1 1.3
dance.txt 1.2 1.4
treehouse.txt 1.3 1.5
File2:
pictures.txt 1.5 ref2313 1.4 ref2345 1.3 ref5432 1.2 ref4244
dance.txt 1.6 ref2342 1.5 ref2352 1.4 ref0695 1.3 ref5738 1.2... (1 Reply)
Hello all,
Here is what my bash script does: sums number columns, saves the tot in new column, outputs if tot >= threshold val:
> cat getnon0file.sh
#!/bin/bash
this="getnon0file.sh"
USAGE=$this"
InFile="xyz.38"
Min="0.05"
#
awk '{sum=0; for(n=2; n<=NF; n++){sum+=$n};... (4 Replies)
I am parsing file for the fields using awk command, first i check 26th field for two characters using substr function if it matches then using for loop on array i search 184th field for 4 chars if it matches then i print the required fields but on execution i get the error, please help...... (5 Replies)
limit.csv data
--------------
5600050 38Nhava
400077 27Bomay
rate.txt data
-------------
38NhaVA
27BomaY
27Bomay
below is my script:
for i in `cat limit.csv`
do
b=`awk '{print $1}' $i` (4 Replies)
Hi ,
Please excuse me for opening a new thread i am unable to find out the syntax error
in my if else condition inside for loop in awk command ,
my actual aim is to print formatted html td tag when if condition (True) having string as "failed",
could anyone please advise what is the right... (2 Replies)
Hi All,
I am new to AWK programming. I have the following for loop in my awk program.
cat printhtml.awk:
BEGIN
-------- <some code here>
END{
----------<some code here>
for(N=0; N<H; N++)
{
for(M=5; M<D; M++) print "\t" D "";
}
-----
}
... (2 Replies)
Dear folks
I have two data set which there names are "final.map" and "1.geno" and look like this structures:
final.map:
gi|358485511|ref|NC_006088.3| 2044
gi|358485511|ref|NC_006088.3| 2048
gi|358485511|ref|NC_006088.3| 2187
gi|358485511|ref|NC_006088.3| 17654
... (2 Replies)
Hi, I'd like to loop an action over all files with given extension within a folder.
The "main" action is: awk -F "\t" 'BEGIN{OFS="\t"}{if ($10=="S") print$0; }' input.txt > output.txt
The input.txt should be every file in the folder with *.subVCF extension; and the output should be a file... (3 Replies)
Dear all,
I would be grateful for your help with the following.
I have the following file (file.txt), which is about 10,000 lines long:
ID1 ID2 0 1 0.5 0.6
ID3 ID4 0 0 0.4 0.8
ID1 ID5 0 1 0.5 0.3
ID6 ID2 1 0 0.4 0.8
The IDs in the first two columns can occur between... (12 Replies)
Discussion started by: aberg
12 Replies
LEARN ABOUT OPENDARWIN
foreach
foreach(n) Tcl Built-In Commands foreach(n)
__________________________________________________________________________________________________________________________________________________NAME
foreach - Iterate over all elements in one or more lists
SYNOPSIS
foreach varname list body
foreach varlist1 list1 ?varlist2 list2 ...? body
_________________________________________________________________DESCRIPTION
The foreach command implements a loop where the loop variable(s) take on values from one or more lists. In the simplest case there is one
loop variable, varname, and one list, list, that is a list of values to assign to varname. The body argument is a Tcl script. For each
element of list (in order from first to last), foreach assigns the contents of the element to varname as if the lindex command had been
used to extract the element, then calls the Tcl interpreter to execute body.
In the general case there can be more than one value list (e.g., list1 and list2), and each value list can be associated with a list of
loop variables (e.g., varlist1 and varlist2). During each iteration of the loop the variables of each varlist are assigned consecutive
values from the corresponding list. Values in each list are used in order from first to last, and each value is used exactly once. The
total number of loop iterations is large enough to use up all the values from all the value lists. If a value list does not contain enough
elements for each of its loop variables in each iteration, empty values are used for the missing elements.
The break and continue statements may be invoked inside body, with the same effect as in the for command. Foreach returns an empty string.
EXAMPLES
The following loop uses i and j as loop variables to iterate over pairs of elements of a single list. set x {} foreach {i j} {a b c d e f}
{
lappend x $j $i } # The value of x is "b a d c f e" # There are 3 iterations of the loop.
The next loop uses i and j to iterate over two lists in parallel. set x {} foreach i {a b c} j {d e f g} {
lappend x $i $j } # The value of x is "a d b e c f {} g" # There are 4 iterations of the loop.
The two forms are combined in the following example. set x {} foreach i {a b c} {j k} {d e f g} {
lappend x $i $j $k } # The value of x is "a d e b f g c {} {}" # There are 3 iterations of the loop.
SEE ALSO
for(n), while(n), break(n), continue(n)
KEYWORDS
foreach, iteration, list, looping
Tcl foreach(n)