Ok, lets suppose I have two files like so:
file1
John 5441223
Sandy 113446
Jill 489799
file2
Sandy Tuesday
Jill Friday
John Monday
Is it possible to match records from these two files and output them into one output file? For example, lets suppose I want to output like this:
... (5 Replies)
I have information in a file called HITS. This file has been populated by the user entering search criteria.
the HITS file contains information:
filname.hits: 123.33.345.66 Fri Nov 26 11.45.56.43 GMT 2006
at the moment i am just displayin the information using cat HITS.
... (3 Replies)
Hi!
I am a newbie to Unix. I was writing a little game program for fun when thought of an idea to allow data to be saved. I knew to take all of the Predefined variables and put them into a separate file, then including the file in the program. But I am having trouble making it so that the user... (0 Replies)
Hi everyone. I realise this is probably a bit of a noob question, but I'm actually a C# developer working on a legacy system, and can't remember much unix.
I want to read from a pipe-delimeted file like formatted thusly:
idno|PRODUCT|Name|street town postcode|etc|etc|etc|etc... (4 Replies)
Stuck on formatting an output. I want to list 6-99 on the screen, looking something like this:
99 98 97 96 95 94 93 92 91 90
89 88 87 86 85 84 83 82 81 80
and so on down to 6.
So far I am only able to print one value per line.
This is what I have
I have defined x as integer x=99... (2 Replies)
I need to enable set -x in my croned script as at times the script is not returning all data that it should be. This only happens intermittently and as such I would like a means of being able to check what goes wrong.
My question is how to output the debug of set -x to file? (1 Reply)
Hi Everyone,
Long time lurker here. I have a project of bringing every one of our data centers to a newly enforced company standard. Standard naming conventions, domain migrations, etc. So, the people who are setting the standards are providing me with a CSV file. Column 1 has the old... (23 Replies)
Hi all,
This is my first ever posting, so please be gentle with me :)
I'm trying to write a script in HP-UX which outputs text in different colours, but although I can get the script to output different colours to the screen, I can't get it to write different colours to a file. Take the... (4 Replies)
Discussion started by: neilharvey
4 Replies
LEARN ABOUT DEBIAN
clonalframe
ClonalFrame(1) General Commands Manual ClonalFrame(1)NAME
ClonalFrame - inference of bacterial microevolution using multilocus sequence data
SYNOPSIS
ClonalFrame [OPTIONS] inputfile outputfile
DESCRIPTION
ClonalFrame identifies the clonal relationships between the members of a sample, while also estimating the chromosomal position of homolo-
gous recombination events that have disrupted the clonal inheritance.
Options:
-x NUM Sets the number of iterations after burn-in (default is 50000)
-y NUM Sets the number of burn-in iterations (default is 50000)
-z NUM Sets the number of iterations between samples (default is 100)
-e NUM Sets the number of branch-swapping moves per iterations (default is so that half of the time is spent branch-swapping)
-m NUM Sets the initial value of theta to NUM (default is Watterson estimate)
-d NUM Sets the initial value of delta to NUM (default is 0.001)
-n NUM Sets the initial value of nu to NUM (default is 0.01)
-r NUM Sets the initial value of R to NUM (default is initial theta/10)
-M Do update the value of theta
-D Do not update the value of delta
-N Do not update the value of nu
-R Do not update the value of R
-T Do not update the topology
-A Do not update the ages of the nodes
-G Remove all gaps
-H Remove all gaps at non-polymorphic positions
-t NUM Indicate which initial tree to use: 0 for a null tree, 1 for a uniformly chosen coalescent tree and 2 for UPGMA tree (default)
-w FILE
Use Newick file for initial tree
-a NUM Sets the first parameter of the beta prior distribution of nu
-b NUM Sets the second parameter of the beta prior distribution of nu
-U Use uniform priors for rho, theta and delta
-B Run in BURST mode
-C Run in UPGMA mode with a site-by-site bootstrap procedure
-c Run in UPGMA mode with a fragment-by-fragment bootstrap procedure
-S NUM Sets the seed for the random number generator to NUM
-E NUM Sets the rate of exponential growth (default is 0)
-I Ignores first block in the alignment
-L Clean-up the alignment before running ClonalFrame
-l Minimum distance between two reference sites (default is 50)
-v Verbose mode
AUTHOR
ClonalFrame was written by Xavier Didelot.
This manual page was written by Andreas Tille <tille@debian.org>, for the Debian project (but may be used by others).
February 2011 1.2 ClonalFrame(1)