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Top Forums Shell Programming and Scripting How to find the matching data b/w 2 files in perl? Post 302418977 by sureshraj on Thursday 6th of May 2010 02:06:58 AM
Old 05-06-2010
How to find the matching data b/w 2 files in perl?

Hi friends,,

i have find the matching data between 2files.
My file1 have a data like
Code:
rs3001336
rs3984736
rs2840532

File2 have a data like
Code:
rs3736330	  1	 2359237	A	G	0.28	   	1.099	        0.010
rs2840532	  1	 2359977	G	A	0.363 	0.3373	1.123	
rs3001336	  1	 2365193	G	A	0.0812	0.07319	1.12	
rs1129333	  1	 2367838	A	G	0.0817	0.0731	1.126	
rs3984736	  1	 2371236	G	A	0.0975	0.08456	1.133	
rs4531246	  1	 2394182	A	C	0.315	        0.9488	0.1

I have to find the matching data from file1 into the file2..
The output format should be like
Code:
rs3001336	  1	 2365193	G	A	0.0812	0.07319	1.12
rs2840532	  1	 2359977	G	A	0.363 	0.3373	1.123	
rs3984736	  1	 2371236	G	A	0.0975	0.08456	1.133

i need a program (in perl or R) to do this task.. pls friends help me

Thanks
Suresh

Last edited by pludi; 05-06-2010 at 03:19 AM.. Reason: code tags, please...
 

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Locale::Codes::LangExt(3pm)				 Perl Programmers Reference Guide			       Locale::Codes::LangExt(3pm)

NAME
Locale::Codes::LangExt - standard codes for language extension identification SYNOPSIS
use Locale::Codes::LangExt; $lext = code2langext('acm'); # $lext gets 'Mesopotamian Arabic' $code = langext2code('Mesopotamian Arabic'); # $code gets 'acm' @codes = all_langext_codes(); @names = all_langext_names(); DESCRIPTION
The "Locale::Codes::LangExt" module provides access to standard codes used for identifying language extensions, such as those as defined in the IANA language registry. Most of the routines take an optional additional argument which specifies the code set to use. If not specified, the default IANA language registry codes will be used. SUPPORTED CODE SETS
There are several different code sets you can use for identifying language extensions. A code set may be specified using either a name, or a constant that is automatically exported by this module. For example, the two are equivalent: $lext = code2langext('acm','alpha'); $lext = code2langext('acm',LOCALE_LANGEXT_ALPHA); The codesets currently supported are: alpha This is the set of three-letter (lowercase) codes from the IANA language registry, such as 'acm' for Mesopotamian Arabic. This is the default code set. ROUTINES
code2langext ( CODE [,CODESET] ) langext2code ( NAME [,CODESET] ) langext_code2code ( CODE ,CODESET ,CODESET2 ) all_langext_codes ( [CODESET] ) all_langext_names ( [CODESET] ) Locale::Codes::LangExt::rename_langext ( CODE ,NEW_NAME [,CODESET] ) Locale::Codes::LangExt::add_langext ( CODE ,NAME [,CODESET] ) Locale::Codes::LangExt::delete_langext ( CODE [,CODESET] ) Locale::Codes::LangExt::add_langext_alias ( NAME ,NEW_NAME ) Locale::Codes::LangExt::delete_langext_alias ( NAME ) Locale::Codes::LangExt::rename_langext_code ( CODE ,NEW_CODE [,CODESET] ) Locale::Codes::LangExt::add_langext_code_alias ( CODE ,NEW_CODE [,CODESET] ) Locale::Codes::LangExt::delete_langext_code_alias ( CODE [,CODESET] ) These routines are all documented in the Locale::Codes::API man page. SEE ALSO
Locale::Codes The Locale-Codes distribution. Locale::Codes::API The list of functions supported by this module. http://www.iana.org/assignments/language-subtag-registry The IANA language subtag registry. AUTHOR
See Locale::Codes for full author history. Currently maintained by Sullivan Beck (sbeck@cpan.org). COPYRIGHT
Copyright (c) 2011-2013 Sullivan Beck This module is free software; you can redistribute it and/or modify it under the same terms as Perl itself. perl v5.18.2 2013-11-04 Locale::Codes::LangExt(3pm)
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