Sponsored Content
Full Discussion: How to join multiple files?
Top Forums Shell Programming and Scripting How to join multiple files? Post 302406716 by theFinn on Tuesday 23rd of March 2010 04:48:57 PM
Old 03-23-2010
How to join multiple files?

I am trying to join a few hundred files using join. Is there a way to use while read or something else to automate this. My problem is the following.

Day 1
Code:
City Temp
ABC    20
DEF    30
HIJ     15

Day 2
Code:
City  Temp
ABC    22
DEF    29
KLM     5

Day 3
Code:
City  Temp
 ABC    24
 DEF    27
 KLM     8

And so on for a few hundred days.

I am trying to make a file that looks like this
Code:
ABC  20,22,24
DEF  30,29,27
HIJ   15,,
KLM  ,5,8

My command looks like this:
Code:
join -t',' -j 2 -a1 -a2 -o 0 1.3 2.3 file1.csv file2.csv

where the common identifier is in column 2 (-j2) and the value i want to amend my master file with is always in column 3 (-o 1.3 2.3). I'm trying to avoid running this command over and over again, as the -o option keeps on growing (-o 1.3 1.4 2.3 --> -0 1.3 1.4 1.5 2.3 --> -o 1.3 1.4 1.5 1.6 2.3 --> -o 1.3 1.4 1.5...1.n 2.3, where n=~200)

Is there a way to use while read or something else to make the file?

Your help is much appreciated.

Thanks.

Last edited by zaxxon; 03-24-2010 at 09:33 AM.. Reason: use code tags please, ty
 

10 More Discussions You Might Find Interesting

1. Shell Programming and Scripting

shell script to join multiple files

I am a new to Linux and try to write a script to join three multiple files. For example, there are three files file1 # comment a Kevin b Vin c Sam file 2 # comment a 10 b 20 c 40 file 3 # comment a blue b yellow (7 Replies)
Discussion started by: bonosungho
7 Replies

2. UNIX for Dummies Questions & Answers

Join multiple Split files in Unix

Hi, I have a big file of 50GB size. I need copy it to a second ftp from a ftp. I am not able to do the full 50GB transfer as it timesout after some time. SO i am trying to split the file into 5gb each 10 files with the below command. split -b 5368709120 pack.tar.gz backup.gz After I... (2 Replies)
Discussion started by: venu_nbk
2 Replies

3. UNIX for Dummies Questions & Answers

Join 2 files with multiple columns: awk/grep/join?

Hello, My apologies if this has been posted elsewhere, I have had a look at several threads but I am still confused how to use these functions. I have two files, each with 5 columns: File A: (tab-delimited) PDB CHAIN Start End Fragment 1avq A 171 176 awyfan 1avq A 172 177 wyfany 1c7k A 2 7... (3 Replies)
Discussion started by: InfoSeeker
3 Replies

4. Shell Programming and Scripting

Join multiple files by column with awk

Hi all, I searched through the forum but i can't manage to find a solution. I need to join a set of files placed in a directory (~1600) by column, and obtain an output with first and second column common to each file, but following columns are taken from the file in the list (precisely the fourth... (10 Replies)
Discussion started by: macsx82
10 Replies

5. Shell Programming and Scripting

Awk - join multiple files

Is it possible to join all the files with input1 based on 1st column? input1 a b c d e f input2 a b input3 a e input4 c (2 Replies)
Discussion started by: quincyjones
2 Replies

6. UNIX for Dummies Questions & Answers

How to use the the join command to join multiple files by a common column

Hi, I have 20 tab delimited text files that have a common column (column 1). The files are named GSM1.txt through GSM20.txt. Each file has 3 columns (2 other columns in addition to the first common column). I want to write a script to join the files by the first common column so that in the... (5 Replies)
Discussion started by: evelibertine
5 Replies

7. Shell Programming and Scripting

Join multiple files

Hi there, I am trying to join 24 files (i showed example of 3 files below). They all have 2 columns. The first columns is common to all. The files are tab delimited eg file 1 rs0001 100e-34 rs0003 2.8e-01 rs008 1.9e-90 file 2 rs0001 1.98e-22 rs0004 3.77e-10... (4 Replies)
Discussion started by: fat
4 Replies

8. Shell Programming and Scripting

Join multiple files with filename

Please help, I want to join multiple files based on column 1, and put the missing values as 0. Also the colname in the output should say which file the values came from. FILE1 1 11 2 12 3 13 FILE2 2 22 3 23 4 24 FILE3 1 31 3 33 4 34 FILE1 FILE2 FILE3 1 11 0 31 (1 Reply)
Discussion started by: newbie83
1 Replies

9. Shell Programming and Scripting

Join files on multiple fields

Hello all, I want to join 2 tabbed files on the first 2 fields, and filling the missing values with 0. The 3rd column in each file is constant for the entire file. file1 12658699 ST5 XX2720 0 1 0 1 53039541 ST5 XX2720 1 0 1.5 1 file2 ... (6 Replies)
Discussion started by: sheetalk
6 Replies

10. Shell Programming and Scripting

Join 2nd column of multiple files

Dear All, I have many files formatted like this: file1.txt: 1/2-SBSRNA4 18 A1BG 3 A1BG-AS1 6 A1CF 0 A2LD1 1 A2M 1160 file2.txt 1/2-SBSRNA4 53 A1BG 1 A1BG-AS1 7 A1CF 0 A2LD1 3 A2M 2780 (5 Replies)
Discussion started by: paolo.kunder
5 Replies
Tk_GetJoinStyle(3)					       Tk Library Procedures						Tk_GetJoinStyle(3)

__________________________________________________________________________________________________________________________________________________

NAME
Tk_GetJoinStyle, Tk_NameOfJoinStyle - translate between strings and join styles SYNOPSIS
#include <tk.h> int Tk_GetJoinStyle(interp, string, joinPtr) const char * Tk_NameOfJoinStyle(join) ARGUMENTS
Tcl_Interp *interp (in) Interpreter to use for error reporting. const char *string (in) String containing name of join style: one of "bevel", "miter", or "round". int *joinPtr (out) Pointer to location in which to store X join style corresponding to string. int join (in) Join style: one of JoinBevel, JoinMiter, JoinRound. _________________________________________________________________ DESCRIPTION
Tk_GetJoinStyle places in *joinPtr the X join style corresponding to string, which will be one of JoinBevel, JoinMiter, or JoinRound. Join styles are typically used in X graphics contexts to indicate how adjacent line segments should be joined together. See the X documentation for information on what each style implies. Under normal circumstances the return value is TCL_OK and interp is unused. If string does not contain a valid join style or an abbrevia- tion of one of these names, then an error message is stored in interp->result, TCL_ERROR is returned, and *joinPtr is unmodified. Tk_NameOfJoinStyle is the logical inverse of Tk_GetJoinStyle. Given a join style such as JoinBevel it returns a statically-allocated string corresponding to join. If join is not a legal join style, then "unknown join style" is returned. KEYWORDS
bevel, join style, miter, round Tk Tk_GetJoinStyle(3)
All times are GMT -4. The time now is 09:17 AM.
Unix & Linux Forums Content Copyright 1993-2022. All Rights Reserved.
Privacy Policy