Hi All,
I am new to this shell scripting world. Struck up with a problem, can anyone of you please pull me out of this.
Requirement : Need to get the index of a substring from a parent string
Eg : index("Sandy","dy") should return 4 or 3.
My Approach :
I used Awk function index to... (2 Replies)
give me a shell-script which extract data from log file on a server by giving date and time as input (for both start time and end time) and it will give the logs generated during the given time as output. (4 Replies)
Hello Scripting Gurus,
I need help with extracting data from the XML file using shell script.
The data is in a large XML and I need to extract the id values of all completedworkflows. Here is a sample of it. Input and output data is also in the attached text files.
<wfregistry>... (5 Replies)
If I have a log like :
Mon Jul 19 05:07:34 2010; TCP; eth3; 52 bytes; from abc to def
Mon Jul 19 05:07:35 2010; UDP; eth3; 46 bytes; from aaa to bbb
Mon Jul 19 05:07:35 2010; TCP; eth3; 52 bytes; from def to ghi
I will need an output like this :
Time abc to def... (1 Reply)
Hi All,
i've a string
/u/asak/DATE/TEST_LOGS/20110704_033429_test11_w_2_120/HDD/test11_w_2_12/hd-120
i need to extract string which is test11_w_2_120, this can be start with anything, numbers, characters with underscore etc.. but the time stamp 20110704_033429_ with two underscores will be... (5 Replies)
Hi to all,
I got this content/pattern from file http.log.20110808.gz
mail1 httpd: Account Notice: close igchung@abc.com 2011/8/7 7:37:36 0:00:03 0 0 1
mail1 httpd: Account Information: login sastria9@abc.com proxy sid=gFp4DLm5HnU
mail1 httpd: Account Notice: close sastria9@abc.com... (16 Replies)
Hi Guru's,
I am new to shell scripting. I have a unique requirement:
The system generates a single pdf(/tmp/ABC.pdf) file with Invoices for Multiple Customers, the format is something like this:
Page1 >> Customer 1 >>Invoice1 + invoice 2 >> Page1 end
Page2 >> Customer 2 >>Invoice 3 + Invoice 4... (3 Replies)
Hi Guys,
I am new to shell script.I need your help to write a shell script.
I need to write a shell script to extract data from a .csv file where columns are ',' separated.
The file has 7 columns having values say column 1,column 2.....column 7 as below along with their values.
Name, Address,... (7 Replies)
Hi everyone,
I have a csv file which has data with different heading and column names as below.
Static Data Ingested
,,,,,,,,,,,,Known Explained Rejections
Column_1,column_2,Column_3,Column_4,,Column_6,Column_7,,% Column_8,,Column_9 ,Column_10 ,... (14 Replies)
I have this 5GB file, and i want to extract from the file particulars pattern.
this is my script:
//
count=`grep -wc "MSISDN" file_name`
k=1
>OUTPUT
>OUTPUT_Final
while
do
cat file_name | awk -F":" -v var="$k" '$1=="MSISDN" {m++}m==var{print; exit}' >> OUTPUT
cat file_name |awk -F":"... (33 Replies)
Discussion started by: gillesi
33 Replies
LEARN ABOUT DEBIAN
bio::map::relativei
Bio::Map::RelativeI(3pm) User Contributed Perl Documentation Bio::Map::RelativeI(3pm)NAME
Bio::Map::RelativeI - Interface for describing what a Position's coordiantes are
relative to.
SYNOPSIS
# do not use this module directly
# See Bio::Map::Relative for an example of
# implementation.
DESCRIPTION
A Relative object is used to describe what the co-ordinates (numerical(), start(), end()) of a Position are relative to. By default they
are implicitly assumed to be relative to the start of the map the Position is on. But setting the relative() of a Position to one of these
objects lets us define otherwise.
FEEDBACK
Mailing Lists
User feedback is an integral part of the evolution of this and other Bioperl modules. Send your comments and suggestions preferably to the
Bioperl mailing list. Your participation is much appreciated.
bioperl-l@bioperl.org - General discussion
http://bioperl.org/wiki/Mailing_lists - About the mailing lists
Support
Please direct usage questions or support issues to the mailing list:
bioperl-l@bioperl.org
rather than to the module maintainer directly. Many experienced and reponsive experts will be able look at the problem and quickly address
it. Please include a thorough description of the problem with code and data examples if at all possible.
Reporting Bugs
Report bugs to the Bioperl bug tracking system to help us keep track of the bugs and their resolution. Bug reports can be submitted via the
web:
https://redmine.open-bio.org/projects/bioperl/
AUTHOR - Sendu Bala
Email bix@sendu.me.uk
APPENDIX
The rest of the documentation details each of the object methods. Internal methods are usually preceded with a _
absolute_conversion
Title : absolute_conversion
Usage : my $absolute_coord = $relative->absolute_conversion($pos);
Function: Convert the start co-ordinate of the supplied position into a number
relative to the start of its map.
Returns : scalar number
Args : Bio::Map::PositionI object
type
Title : type
Usage : my $type = $relative->type();
Function: Get the type of thing we are relative to. The types correspond
to a method name, so the value of what we are relative to can
subsequently be found by $value = $relative->$type;
Note that type is set by the last method that was set, or during
new().
Returns : the string 'map', 'element' or 'position', or undef
Args : none
map
Title : map
Usage : my $int = $relative->map();
$relative->map($int);
Function: Get/set the distance from the start of the map that the Position's
co-ordiantes are relative to.
Returns : int
Args : none to get, OR
int to set; a value of 0 means relative to the start of the map.
element
Title : element
Usage : my $element = $relative->element();
$relative->element($element);
Function: Get/set the map element (Mappable) the Position is relative to. If
the Mappable has more than one Position on the Position's map, we
will be relative to the Mappable's first Position on the map.
Returns : Bio::Map::MappableI
Args : none got get, OR
Bio::Map::MappableI to set
position
Title : position
Usage : my $position = $relative->position();
$relative->position($position);
Function: Get/set the Position your Position is relative to. Your Position
will be made relative to the start of this supplied Position. It
makes no difference what maps the Positions are on.
Returns : Bio::Map::PositionI
Args : none got get, OR
Bio::Map::PositionI to set
description
Title : description
Usage : my $description = $relative->description();
$relative->description($description);
Function: Get/set a textual description of what this relative describes.
Returns : string
Args : none to get, OR
string to set
perl v5.14.2 2012-03-02 Bio::Map::RelativeI(3pm)