Sponsored Content
Top Forums Shell Programming and Scripting Match strings in two files and compare columns of both Post 302393078 by jackygrahamez on Sunday 7th of February 2010 05:36:38 PM
Old 02-07-2010
This example works, I have a little more complicated comparison opperation. I have an index of IDs. These IDs are part of several substrings of a file. I want to see which IDs are in the file and which ones are not. Here are a few lines.

23873_ChemDiv_000A-0001
AVtclcactv01291016372D 0 0.00000 0.00000 1

31 34 0 0 0 0 0 0 0 0999 V2000

The ID is the first 5 characters of this string 23873_ChemDiv_000A-0001
 

10 More Discussions You Might Find Interesting

1. Shell Programming and Scripting

How to compare 2 files & get only few columns based on a condition related to both files?

Hiiiii friends I have 2 files which contains huge data & few lines of it are as shown below File1: b.dat(which has 21 columns) SSR 1976 8 12 13 10 44.00 39.0700 70.7800 7.0 0 0.00 0 2.78 0.00 0.00 0 0.00 2.78 0 NULL ISC 1976 8 12 22 32 37.39 36.2942 70.7338... (6 Replies)
Discussion started by: reva
6 Replies

2. Shell Programming and Scripting

Compare one files with strings from another + remove lines

Have two files and want to compare the content of file1 with file2. When matched remove the line. awk 'NR==FNR {b; next} !(b in $0)' file1 file2file1 1. if match 2. removefile2 1. this line has to be removed if match 2. this line has a match, remove 3. this line has no match, no removingThe... (3 Replies)
Discussion started by: sdf
3 Replies

3. Shell Programming and Scripting

Match list of strings in File A and compare with File B, C and write to a output file in CSV format

Hi Friends, I'm a great fan of this forum... it has helped me tone my skills in shell scripting. I have a challenge here, which I'm sure you guys would help me in achieving... File A has a list of job ids and I need to compare this with the File B (*.log) and File C (extend *.log) and copy... (6 Replies)
Discussion started by: asnandhakumar
6 Replies

4. Shell Programming and Scripting

Match columns several files

Hey fellas! Here come my problem. I appreciate if you have a look at it. I have several files with following structure: file_1:1 21 4 45 file_2:2 31 4 153 6 341 and so on... and I have a 'reference' file look like this: File_ref:A 1 B 2 C 3 (5 Replies)
Discussion started by: @man
5 Replies

5. Shell Programming and Scripting

Match the columns between 2 files

I have two files I want to match ids in the 5th column of the file 1 with the first column of the file 2 and get the description for the matched ids as shown in the output sno nm no nm2 ID 1 cc 574372 yyyi |6810|51234| 2 bb 119721 nmjk |6810|51234|51179| ... (4 Replies)
Discussion started by: raj_k
4 Replies

6. Shell Programming and Scripting

Match strings in 2 different files

Hi, i am trying to match strings from 2 different files based on position like below:- file1 (tab delimited) f07270 lololol fff u12730 gggddd dddkkrr mmm file2 (not tab delimited) %f07270 APSLH bl%alalalalallaadsdsfdfdfdgsgfss %g13450 GDIDFLRIP%ILITEAPPRKgsfgsgsf %d08880... (11 Replies)
Discussion started by: redse171
11 Replies

7. Shell Programming and Scripting

Compare 2 csv files by columns, then extract certain columns of matcing rows

Hi all, I'm pretty much a newbie to UNIX. I would appreciate any help with UNIX coding on comparing two large csv files (greater than 10 GB in size), and output a file with matching columns. I want to compare file1 and file2 by 'id' and 'chain' columns, then extract exact matching rows'... (5 Replies)
Discussion started by: bkane3
5 Replies

8. UNIX for Dummies Questions & Answers

Match the columns between two files and output

Hi Help, I have two files namely a.txt and b.txt a.txt looks like a.txt 1 2 2 1 3 3 2 4 4 4 5 6 6 7 7 b.txt looks like, b.txt 1 2 1 1 3 2 2 4 3 3 4 4 4 5 5 (2 Replies)
Discussion started by: Indra2011
2 Replies

9. UNIX for Beginners Questions & Answers

Data match 2 files based on first 2 columns matching only and join if match

Hi, i have 2 files , the data i need to match is in masterfile and i need to pull out column 3 from master if column 1 and 2 match and output entire row to new file I have tried with join and awk and i keep getting blank outputs or same file is there an easier way than what i am... (4 Replies)
Discussion started by: axis88
4 Replies

10. UNIX for Beginners Questions & Answers

Match patterns between two files and extract certain range of strings

Hi, I need help to match patterns from between two different files and extract region of strings. inputfile1.fa >l-WR24-1:1 GCCGGCGTCGCGGTTGCTCGCGCTCTGGGCGCTGGCGGCTGTGGCTCTACCCGGCTCCGG GGCGGAGGGCGACGGCGGGTGGTGAGCGGCCCGGGAGGGGCCGGGCGGTGGGGTCACGTG... (4 Replies)
Discussion started by: bunny_merah19
4 Replies
GETGROUPS(2)						     Linux Programmer's Manual						      GETGROUPS(2)

NAME
getgroups, setgroups - get/set list of supplementary group IDs SYNOPSIS
#include <sys/types.h> #include <unistd.h> int getgroups(int size, gid_t list[]); #include <grp.h> int setgroups(size_t size, const gid_t *list); DESCRIPTION
getgroups Up to size supplementary group IDs are returned in list. It is unspecified whether the effective group ID of the calling process is included in the returned list. (Thus, an application should also call getegid(2) and add or remove the resulting value.) If size is zero, list is not modified, but the total number of supplementary group IDs for the process is returned. setgroups Sets the supplementary group IDs for the process. Only the super-user may use this function. RETURN VALUE
getgroups On success, the number of supplementary group IDs is returned. On error, -1 is returned, and errno is set appropriately. setgroups On success, zero is returned. On error, -1 is returned, and errno is set appropriately. ERRORS
EFAULT list has an invalid address. EPERM For setgroups, the user is not the super-user. EINVAL For setgroups, size is greater than NGROUPS (32 for Linux 2.0.32). For getgroups, size is less than the number of supplementary group IDs, but is not zero. NOTES
A process can have up to at least NGROUPS_MAX supplementary group IDs in addition to the effective group ID. The set of supplementary group IDs is inherited from the parent process and may be changed using setgroups. The maximum number of supplementary group IDs can be found using sysconf(3): long ngroups_max; ngroups_max = sysconf(_SC_NGROUPS_MAX); The maximal return value of getgroups cannot be larger than one more than the value obtained this way. The prototype for setgroups is only available if _BSD_SOURCE is defined (either explicitly, or implicitly, by not defining _POSIX_SOURCE or compiling with the -ansi flag). CONFORMING TO
SVr4, SVID (issue 4 only; these calls were not present in SVr3), X/OPEN, 4.3BSD. The getgroups function is in POSIX.1. Since setgroups requires privilege, it is not covered by POSIX.1. SEE ALSO
initgroups(3), getgid(2), setgid(2) Linux 2.0.32 1997-12-10 GETGROUPS(2)
All times are GMT -4. The time now is 12:19 PM.
Unix & Linux Forums Content Copyright 1993-2022. All Rights Reserved.
Privacy Policy