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Top Forums Programming Why does this occur? *** glibc detected *** malloc(): memory corruption: 0x10013ff8 *** Post 302367056 by achenle on Saturday 31st of October 2009 08:04:51 PM
Old 10-31-2009
Quote:
Originally Posted by cdbug
Add return statement and change return type and it can work.

But it still fails after generating many vertices. Notice where failure occurs

This seems to be a general problem.

Thanks for all your help

____________________________________
Program received signal SIGSEGV, Segmentation fault.
0x0027ff92 in _int_malloc () from /lib/tls/libc.so.6
(gdb) bt
#0 0x0027ff92 in _int_malloc () from /lib/tls/libc.so.6
#1 0x0027f0fd in malloc () from /lib/tls/libc.so.6
#2 0x0804956e in make_vertex (ver=0xbfffb624, index=-1, se=0, ps=2)


Code:
vertex *root;
root = make_vertex(&root, -1, 0, -1);


static vertex* make_vertex(vertex **ver, int index, int s, int ps)
{
        ver = (vertex **)malloc(sizeof(vertex *)); //Here:fails
        if (ver == NULL)
            exit(1);

        *ver = (vertex *)malloc(sizeof(vertex));
        if ( *ver == NULL ) {
            printf("memory allocation error\n");
            exit(1);
        }

        (*ver)->id        = index;
        (*ver)->seq       = s;
        (*ver)->pos       = ps;
        (*ver)->clique    = 0;
        (*ver)->numOfPrev = 0;
        (*ver)->numOfVer  = 0;
        (*ver)->numOfNext = 0;
        (*ver)->prev      = NULL;
        (*ver)->next      = NULL;
        (*ver)->front     = NULL;
        (*ver)->back      = NULL;
        (*ver)->left      = NULL;
        (*ver)->right     = NULL;

    return *ver;
}



---------- Post updated at 12:37 PM ---------- Previous update was at 11:01 AM ----------

Tried to use make_vertex. It can change memory in this way. A new trouble takes place. Allocation really gives unexpected problems.

dataset[4] changes
__________________________________________________________________
110 r = make_vertex(&rho, -1, 0, i);
(gdb) p *(dataset+3)
$33 = 0x8145200 "AATTGTAAC"
(gdb) p *(dataset+4)
$34 = 0x8145a30 "GCTGAATGA"
(gdb) n
111 first = rho;
(gdb) p *(dataset+3)
$35 = 0x8145200 "AATTGTAAC"
(gdb) p *(dataset+4)
$36 = 0xb25a90 "\210Zē"
First, if you're going to overwrite the original contents of the pointer you pass it, why bother passing in its address in the first place?

Code:
static vertex* make_vertex( int index, int s, int ps )
{
    vertex *ver;
    ver = ( vertex * ) calloc( sizeof( vertex ) );
    if ( NULL != ver )
    {
        ver->id = index;
        ver->seq = s;
        ver->pos = ps;
    }
    return( ver );
}

If THAT blows up, your heap is getting corrupted before you even make the call to make_vertex().
 

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MDBTools(1)															       MDBTools(1)

NAME
mdb-ver - Return the format of a given MDB database. SYNOPSIS
mdb-ver database mdb-ver -M DESCRIPTION
mdb-ver is a utility program distributed with MDB Tools. It will return a single line of output with either 'JET3' for those files produced in Access 97 format or 'JET4' for those produced by Access 2000 and XP. OPTIONS
-M Prints the version of MDB Tools itself instead of the MDB file. NOTES
Access changed its format between Jet 3 used in Access 97 and Jet 4 used for Access 2000 and XP. The nature of the changes included moving the page size from 2K to 4K and added support for unicode. MDB Tools actively supports both formats. ENVIRONMENT
MDB_JET3_CHARSET Defines the charset of the input JET3 (access 97) file. Default is CP1252. See iconv(1). MDBICONV Defines the output charset. Default is UTF-8. mdbtools must have been compiled with iconv. MDBOPTS semi-column separated list of options: o use_index o no_memo o debug_like o debug_write o debug_usage o debug_ole o debug_row o debug_props o debug_all is a shortcut for all debug_* options HISTORY
mdb-ver first appeared in MDB Tools 0.4. SEE ALSO
gmdb2(1) mdb-export(1) mdb-hexdump(1) mdb-prop(1) mdb-sql(1) mdb-array(1) mdb-header(1) mdb-parsecsv(1) mdb-schema(1) mdb-tables(1) AUTHORS
The mdb-ver utility was written by Brian Bruns. BUGS
mdb-ver does minimal checking on the validity of a file. It is possbile for it to misidentify a non-MDB file. mdb-ver does not recognize Access 2.0 (Jet 2) or the newer MSDE format files. 0.7 13 July 2013 MDBTools(1)
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