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Full Discussion: How to filter data
Top Forums UNIX for Dummies Questions & Answers How to filter data Post 302364899 by Scott on Saturday 24th of October 2009 01:29:56 PM
Old 10-24-2009
Hi.

It means if the line contains the string WADRAIN and field three contains the number 1, then print the line

Fields are separated by a comma (-F",")

If you want WAMRAIN too, then:

Code:
awk -F, '/WA[DM]RAIN/ && $3' filename


Last edited by Scott; 10-24-2009 at 02:38 PM.. Reason: added WAMRAIN!
 

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BP_EINFO(1p)						User Contributed Perl Documentation					      BP_EINFO(1p)

NAME
einfo.pl - query einfo to find all available databases or information about a specific database (field information or links to other NCBI databases) SYNOPSIS
einfo [-d database] [-f Field Code] [-l Link Name] [-o outfile] DESCRIPTION
Command line options: -e/--email Valid email (required by NCBI policy) -d/--db/--database NCBI database to query (default = none, which shows available databases) -f/--field print out information about a specific field code (default = none) -l/--link print out information about a specific link name (default = none) -o/--out outfile (default = STDOUT) -h/--help show this documentation As per NCBI's policy regarding eutils access, a valid email is required. This is not enforced here (if one is provided you will get a standard warning), but don't be surprised if this doesn't work after June 1, 2010 unless one is supplied. If -d is not specified, field and link arguments are ignored and all available databases are printed instead. If either link names or field codes (or both) are specified, nothing else is printed out (only the info requested). You can specify as many fields and/or links as you want by using multiple -f/-l <ARG> on the command line. AUTHOR - Chris Fields Chris Fields cjfields at bioperl dot org perl v5.14.2 2012-03-02 BP_EINFO(1p)
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