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Full Discussion: match range of different numbers by AWK
Top Forums Shell Programming and Scripting match range of different numbers by AWK Post 302338084 by repinementer on Monday 27th of July 2009 04:56:59 AM
Old 07-27-2009
Edited
I have a made a small correction in the second script you made (sec = $2) as per my need. Every thing working fine but it printing 2 times if the flag is "-" and working fine with "+"

Could you help me to find the error tht printing twice the result

Thanx

Code:
  awk '{
  sec = $2; fifth = split($5, _fifth, ","); sixth = split($6, _sixth, ",")
  counter = 0; key = $1; flag = $4; sub(/[^ \t*]*/, "")
  dummy = sprintf("%*s", length(key),x)
  for (i=1; i<=sixth; i++) {
    second_third = sec + _sixth[i] FS _fifth[i] + sec + _sixth[i]
    third_second = _fifth[i] + sec + _sixth[i] FS sec + _sixth[i] 
    if (flag == "+") 
      rec = rec ? rec RS dummy OFS second_third : key OFS second_third OFS $0
    else  
      rec_rev = rec_rev ? \
        (++counter == sixth - 1 ? key OFS third_second OFS $0 : dummy OFS third_second ) RS rec_rev : \
        dummy OFS third_second
    }
  print (flag == "+" ? rec : rec_rev)    
 }' OFS='\t' ORS='\n\n' r1.txt

input
Code:
chr1    61223    1201233    -    5,10,15,10,20    0,25,40,75,95
chr1    61223    1201233    +   5,10,15,10,20    0,25,40,75,95

ouput

Code:
chr1    61338 61318        61223    1201233    -    5,10,15,10,20    0,25,40,75,95
        61308 61298
        61278 61263
        61258 61248
        61228 61223

chr1    61338 61318        61223    1201233    -    5,10,15,10,20    0,25,40,75,95
        61308 61298
        61278 61263
        61258 61248
        61228 61223
chr1    61223 61228        61223    1201233    +    5,10,15,10,20    0,25,40,75,95
        61248 61258
        61263 61278
        61298 61308
        61318 61338

 

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LEARN ABOUT SUSE

igawk

IGAWK(1)							 Utility Commands							  IGAWK(1)

NAME

       igawk - gawk with include files

SYNOPSIS

       igawk [ all gawk options ] -f program-file [ -- ] file ...
       igawk [ all gawk options ] [ -- ] program-text file ...

DESCRIPTION

       Igawk is a simple shell script that adds the ability to have ``include files'' to gawk(1).

       AWK programs for igawk are the same as for gawk, except that, in addition, you may have lines like

	      @include getopt.awk

       in your program to include the file getopt.awk from either the current directory or one of the other directories in the search path.

OPTIONS

       See gawk(1) for a full description of the AWK language and the options that gawk supports.

EXAMPLES

       cat << EOF > test.awk
       @include getopt.awk

       BEGIN {
	    while (getopt(ARGC, ARGV, "am:q") != -1)
		 ...
       }
       EOF

       igawk -f test.awk

SEE ALSO

       gawk(1)

       Effective AWK Programming, Edition 1.0, published by the Free Software Foundation, 1995.

AUTHOR

       Arnold Robbins (arnold@skeeve.com).

Free Software Foundation					    Nov 3 1999								  IGAWK(1)
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