Currently what i've done is only to retrieve records no later than an hour.
want to extend the feature to include retrieving of records within 15mins of current time. I don't think my current method can be applicable to 15mins intervals..
Code:
str=`TZ=GMT-7 date +%b" "%d" "%H:` # this sets a time earlier by one hour.
#echo str will give you something like "Jun 18 01:"
grep "$str" test.log > new.log # test.log refers to the file format that i've mentioned earlier.
Hi,
I have one file, say file 1, that has data like below where 19900107 is the date,
19900107 12 144 129 0.7380047
19900108 12 168 129 0.3149017
19900109 12 192 129 3.2766666E-02
... (3 Replies)
i have something like this in a file called mysqldump.sql
--
-- Table structure for table `Table11`
--
DROP TABLE IF EXISTS `Table11`;
/*!40101 SET @saved_cs_client = @@character_set_client */;
/*!40101 SET character_set_client = utf8 */;
CREATE TABLE `Table11` (
`id` int(11) NOT NULL... (14 Replies)
consider the following is the contents of the file
cat 11.sql
drop procedure if exists hoop1 ;
Delimiter $$
CREATE PROCEDURE hoop1(id int)
BEGIN
END
$$
Delimiter ;
.
.
.
.
drop procedure if exists hoop2;
Delimiter $$
CREATE PROCEDURE hoop2(id int)
BEGIN
END
$$ (8 Replies)
hi
i have an input file that contains some thing like this
aaa acc aa abc1 1232 aaa abc2....
poo awq aa abc1 aaa aaa abc2
bbb bcc bb abc1 3214 bbb abc3....
bab bbc bz abc1 3214 bbb abc3....
vvv ssa as abc1 o09 aaa abc4....
azx aaq aa abc1 900 aqq abc19....
aaa aa aaaa abc1 899 aa... (8 Replies)
Hi,
I am trying to extract lines from a text file given a text file containing line numbers to be extracted from the first file. How do I go about doing this? Thanks! (1 Reply)
Hi All,
i have some log files generated in a folder daily with the format
abc.def.20130306.100001
ghi.jkl.20130306.100203
abc.def.20130305.100001
ghi.jkl.20130305.100203
the format is the date followed by time . all i want is to get the files that are generated for todays... (3 Replies)
Hello,
I have a file ff.txt that looks as follows
*ABNA.txt
356
24
36
112
*AC24.txt
457
458
321
2
ABNA.txt and AC24.txt are the files in the folder named foo1. Based on the numbers in the ff.txt file, I want to extract the lines from the corresponding files in the foo1 folder and... (2 Replies)
Hello!
I'm trying to process a text file and am stuck at 2 extractions. Hoping someone can help me here:
1. Given a line in a text file and given a keyword, how can I extract the word preceeding the keyword using a shell command/script?
For example: Given a keyword "world" in the line: ... (2 Replies)
Discussion started by: seemad
2 Replies
LEARN ABOUT DEBIAN
trna2sap
TRNA2SAP(1) NCBI Tools User's Manual TRNA2SAP(1)NAME
trna2sap - convert tRNAscan-SE output to an ASN.1 Seq-annot object
SYNOPSIS
trna2sap [-] [-a] [-c str] [-f str] [-i filename] [-j] [-m str] [-n str] [-o filename] [-p dir] [-r dir] [-s] [-t str] [-u] [-x str]
DESCRIPTION
trna2sap reads a text file produced by tRNAscan-SE and produces a corresponding ASN.1 Seq-annot in the format understood by other NCBI
tools.
OPTIONS
A summary of options is included below.
- Print usage message
-a Add tRNAscan-SE citation
-c str Comment
-f str Substring Filter
-i filename
Single Input file (standard input by default)
-j Just produce a five-column feature table, a la trna2tbl(1).
-m str ReMark
-n str Annotation Name (normally "tRNA").
-o filename
Single Output file (standard output by default)
-p dir Path to files
-r dir Path for Results
-s Ignore Pseudo tRNAs
-t str Annotation Title (normally "tRNAscan-SE").
-u Ignore Undetermined tRNAs
-x str File selection suffix with -p (.trna by default).
AUTHOR
The National Center for Biotechnology Information.
SEE ALSO sequin(1), tbl2asn(1), trna2tbl(1).
NCBI 2006-01-11 TRNA2SAP(1)