Hi,
I am using diff filename1 filename2,
as these files are of huge size,I want to know the count(n) no. of different records to be displayed on the terminal.
I do not want the contents of file i mean different lines to be displayed.
Cheers
Kunal. (0 Replies)
Hi I have two variables contining a set of near identical lines, i'd like to list the lines that differ? Prefereably i'd like not to save the variables into a file first.
i.e
var1
tag:val1
tag:val2
tag:val3
var2
tag:val1
tag:val4
tag:val3
i'd like the result to print out... (2 Replies)
I am comparing two files which are identical except for the timestamp which is incorporated within the otherwise same 372 bytes. I am using the command:
cmp -s $Todays_file $Yesterdays_file -i 372
When I run the command without the -i 372 it shows the difference i.e. the timestamp.... (5 Replies)
Please don't count this as a similar post.....I got the ftp part working....I am stuck how to find the files between two dates.
I have 5 files
filename.20090505.txt
filename.20090504.txt
filename.20090503.txt
filename.20090502.txt
filename.20090501.txt
My load date is 20090501 and run date... (5 Replies)
Dear all,
for i in <List of Filename>
FILENAME=`echo $i`
do
cp -p $FILENAME /temp
/bin/cmp $FILENAME /temp/$FILENAME
done
I am planning to do something like this on a daily basis, so i want to ask that, if the comparison on the files encounter error,
... (2 Replies)
i recently copied 400GB of data from a NTFS drive to a ext4 drive. I want to verify that the data is 100% identical to the original.
I wanted to use cmp but it only does two files. The directory that was copied contains many subdirectories and all sorts of files (not just text).
So I guess... (5 Replies)
Hi all, I need your help fixing an issue with this code. I am a newbie to UNIX programming and there is an issue with this code I am hoping you can help me correct.
I have two files (system_files with 8342 records and rules1.txt file with 762 records). My understanding from the script below, is... (2 Replies)
more prod.properties
# remote connection details
cdr_url=http://myprod.col.net:1890/service
cdr_user=user1
cdr_pswd=pass11
boot_time=ON
more back.properties
cdr_url=http://myback.col.net:1890/service
cdr_user=user1
cdr_pswd=pass11
storage=file
I need to compare the back.properties... (6 Replies)
Discussion started by: mohtashims
6 Replies
LEARN ABOUT DEBIAN
vcf-compare
VCF-COMPARE(1) User Commands VCF-COMPARE(1)NAME
vcf-compare - compare bgzipped and tabix indexed VCF files
SYNOPSIS
compare-vcf [OPTIONS] file1.vcf file2.vcf ...
DESCRIPTION
About: Compare bgzipped and tabix indexed VCF files. (E.g. bgzip file.vcf; tabix -p vcf file.vcf.gz)
OPTIONS -c, --chromosomes <list|file>
Same as -r, left for backward compatibility. Please do not use as it will be dropped in the future.
-d, --debug
Debugging information. Giving the option multiple times increases verbosity
-H, --cmp-haplotypes
Compare haplotypes, not only positions
-m, --name-mapping <list|file>
Use with -H when comparing files with differing column names. The argument to this options is a comma-separated list or one mapping
per line in a file. The names are colon separated and must appear in the same order as the files on the command line.
-R, --refseq <file>
Compare the actual sequence, not just positions. Use with -w to compare indels.
-r, --regions <list|file>
Process the given regions (comma-separated list or one region per line in a file).
-s, --samples <list>
Process only the listed samples. Excluding unwanted samples may increase performance considerably.
-w, --win <int>
In repetitive sequences, the same indel can be called at different positions. Consider records this far apart as matching (be it a
SNP or an indel).
-h, -?, --help
This help message.
vcf-compare 0.1.5 July 2011 VCF-COMPARE(1)