02-22-2009
Help loading a program into perl from a file on desktop
So I want to use this program that I have downloaded from:
PaGE - Patters from Gene Expression
However, I am not sure how to actually get in to and run the program... I can log into the server, and was assuming I needed to get the "PaGE_5.1.6.pl" file into a folder some how, but not sure how to do it.
I tried opening the txt doc and copy and pasting it's contents into a perl file after opening a vi file, but it made the computer beep and buzz out in error, and didn't paste anything into the file.
I tried looking around the site to for them to guide me in to how I would actually get the program "installed" but no luck so far.
If someone can give me some pointers on how to get the thing installed, that would be great. I have a hard enough time installing things on windows right, so this command line stuff baffles me. Thanks!
9 More Discussions You Might Find Interesting
1. Shell Programming and Scripting
Hi,
I have the following, it doesn't work and I know it's crap code.
The objective is to split a file with a givin number of codes such as:
01,02,03,...,99
Then return all records with each seperate identifier in a new file.
The files being split have lrecl=500, recfm=F, and I... (4 Replies)
Discussion started by: mkastin
4 Replies
2. Shell Programming and Scripting
I'm trying to load a set of variables as defined by a local configuration file. Not too sure what I'm missing so I'll just post it as a whole.
blub.pl
#!/usr/bin/perl
use strict;
use warnings;
my $config_file="blub.config";
Config_Loader();
sub Config_Loader {... (8 Replies)
Discussion started by: adelsin
8 Replies
3. Shell Programming and Scripting
Hi,
I have a input file with following values
(test.out)
I would like to grep all lines with word 'PANIC' and sent it another file using perl program with grep command. I have been trying different ways and not working. Pls advice. Thanks a lot for the help.
--example--... (3 Replies)
Discussion started by: hudson03051nh
3 Replies
4. Shell Programming and Scripting
Hi,
I want to configure some values in config file like below
work_dir /home/work
csv_dir /home/csv
sql_dir /home/sqls
reportfirst yes
and i want to store each value in variable to use it further in my my perl program ??
any thought on this(i am new to perl) ?
... (2 Replies)
Discussion started by: raghavendra.nsn
2 Replies
5. UNIX for Dummies Questions & Answers
Hi guys,
Good day! Anyone there could suggest on how can I create a program that will get (ftp) the logs I need from a remote Server (running in Linux) into my Desktop (running in Windows 7). For Perl program suggestions, FYI that I'm using Active Perl version. The reason why I need this one is... (2 Replies)
Discussion started by: rymnd_12345
2 Replies
6. Programming
Hi,
I have 5 files as below
$ ll sam*
-rw-rw-rw- 1 sam ugroup 0 Mar 21 06:06 sam3
-rw-rw-rw- 1 sam ugroup 0 Apr 3 22:41 sam2
-rw-rw-rw- 1 sam ugroup 17335 Apr 10 06:07 sam1
-rw-rw-rw- 1 sam ugroup 5 Apr 10 07:53 sam5
-rw-rw-rw- 1 sam ugroup 661 Apr 10 08:16 sam4
I want to list out... (4 Replies)
Discussion started by: sam05121988
4 Replies
7. Shell Programming and Scripting
Hi
I have a file
name1 xxxxx
name1 xxxxx
name1 yyyyy
name 1 zzzzz
name1 Uniprot Id 1234
name2 sssss
name2 eeeee
name2 bengamine
name2 Uniprot Id 3456
......................and so on
I have to capture Uniprot IDs only in a separate file so that output contain only
... (20 Replies)
Discussion started by: manigrover
20 Replies
8. UNIX for Dummies Questions & Answers
I'm trying to load a program remotely using SSH with X11 forwarding. I have no issue with loading xwindows and programs like firefox works fine. But one software that I use for my work has some issues when I load it up. For example, I can't see the pull-down menus etc, which show up when I load it... (1 Reply)
Discussion started by: lost.identity
1 Replies
9. Fedora
Well, I followed the steps in the Debian wiki here to install the drivers for the following video card:
$ lspci | grep VGA
03:00.0 VGA compatible controller: NVIDIA Corporation GF104 (rev a1)I confirmed the correct driver is installed. As you probably see I've tried this a few times and a few... (1 Reply)
Discussion started by: Azrael
1 Replies
LEARN ABOUT DEBIAN
swac-get
SWAC-GET(1) General Commands Manual SWAC-GET(1)
NAME
swac-get - audio collections of words (SWAC) manager
SYNOPSIS
swac-get [-t] [clear] [update] | [upgrade] | [select <url|packid>] | [deselect <url|packid>] | [list] | [list-sources] | [list-available] |
[sql <query>] | [--help] | [--version]
DESCRIPTION
Swac-get is a simple command line program which allows to download and install audio collections of words (SWAC) in a SQLite3 database.
Audio collections can be imported from the hard drive or directly from the Internet using the HTTP protocol. Swac-get is designed to be
used with swac-explore, a GTK+ interface which allows the browsing of the created SQLite3 database. An important set of free audio collec-
tions of words (SWAC) is available at: http://swac-collections.org/
For more information, please, visit the Shtooka Project homepage at: http://shtooka.net/ .
COMMANDS
clear clear database
deselect <url|packid>
delete records of the package <url|packid> from the database
list list installed packages
list-available
list available packages
list-sources
list source repositories
sql <query>
execute a sql query in the database
select <url|packid>
insert records of the package <url|packid> in the database
ex: swac-get select file:///home/<my directory>/
swac-get select http://packs.shtooka.net/<my package>/ogg/
swac-get select fra-balm-voc
select source-delete <url>
delete <url> from the repositories list
source-deselect <url>
deselect <url> from the repositories list
source-select <url>
add <url> to the repositories list
ex: swac-get source-select http://packs.shtooka.net/
swac-get source-select file:///home/<my directory>/
update update the list of available packages
upgrade
upgrade installed packages
OPTIONS
-t, --target <path>
set the SQLite3 database path (default path is ~/.swac/swac.db)
-v, --version
print version information and exit
-h, --help
print this help and exit
EXAMPLES
swac-get source-select http://packs.shtooka.net/
swac-get update
swac-get select chi-balm-hsk1
swac-get select fra-balm-voc
BUGS
swac-get doesn't care about the version number for the upgrade command.
AUTHOR
swac-get and this manual page were written by Nicolas Vion <nico@picapo.net>.
mai 25, 2008 SWAC-GET(1)