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Top Forums Shell Programming and Scripting read in variable data from another file - grep Post 302268859 by ccox85 on Tuesday 16th of December 2008 12:13:31 PM
Old 12-16-2008
Quote:
Originally Posted by nj78
for name in list
do
egrep ^$name pattern > $name.out

done
I dont understand how this would work. It looks to me like list would be the file name of my list file, and name would just read in each record in the file (??? I dont know if that is the right interpretation). Then, the grep command looks for lines in the data file that start with the subject numbers in the list file. However, If I print to >> $name.out, then I am going to have a new file for every subject... which would not be good. I want to group by experimental condition.

If I am interpreting this correctly, I would be able to to this and just define the output files name to explicly be the ec number, if I read from my individual lists that are already grouped by condition.

Is there a way to read in column $1 from the list file (which is the ec) and have that govern the name of the .out, and then read the second column of the list file (the subject number) into the grep search pattern pattern?

So the grep line would be something like this, i think:
Code:
grep '^$2' all.inq >> $1.out

I just dont know how to read in the master list file so that it would work.
 

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xowish(1)							XOTcl Applications							 xowish(1)

__________________________________________________________________________________________________________________________________________________

NAME
xowish - Graphical shell containing object-oriented scripting language XOTcl SYNOPSIS
xowish ?fileName arg arg ...? _________________________________________________________________ DESCRIPTION
xowish is a shell-like application that reads XOTcl commands from its standard input or from a file and evaluates them. In addition to xot- clsh it provides graphical user interface support for TK widgets. XOTcl (XOTcl, pronounced exotickle) is an object-oriented scripting language based on MIT's OTcl. It is intended as a value added replace- ment for OTcl. Scripting languages, like Tcl, are designed for glueing components together, provide features like dynamic extensibility and dynamic typing with automatic conversion, that make them well suited for rapid application development. The basic object system of XOTcl is adopted from OTcl. The object system enables us to define objects, classes, and meta-classes. Classes are special objects with the purpose of managing other objects. ``Managing'' means that a class controls the creation and destruction of its instances and that it contains a repository of methods accessible for the instances. Every object may be enhanced with object-specific methods. XOTcl supports single and multiple inheritance. All relationships in XOTcl, including class and superclass relationships, are com- pletely dynamic and can be introspected. Through method chaining without explicit naming of the intended method, ambiguities in name reso- lution of methods are avoided. This way a shadowed method can be ``mixed into'' the execution of the current method. XOTcl combines the ideas of scripting and object-orientation in a way that preserves the benefits of both of them. It is equipped with sev- eral new language functionalities that help building and managing complex systems. We added the following support: Dynamic Object Aggregations, to provide dynamic aggregations through nested namespaces (objects). Nested Classes, to reduce the interference of independently developed program structures. Assertions, to reduce the interface and the reliability problems caused by dynamic typing and, therefore, to ease the combination of many components. Meta-data, to enhance self-documentation of objects and classes. Per-object mixins, as a means to improve flexibility of mixin methods by giving an object access to several different supplemental classes, which may be changed dynamically. Per-class mixins, as a means to improve flexibility of mixin methods to a class, all instances of the class have access to the mixed in methods like for multiple inheritance, but without the need of intersection classes. Filters as a means of abstractions over method invocations to implement large program structures, like design patterns. Dynamic Component Loading XOTcl integrates the Tcl package loading with architectrual support for integration with object-oriented con- structs. Moreover, it provides tracking/tracing of component loading. KEYWORDS
argument, interpreter, prompt, script file, shell XOWish xowish(1)
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