PARREC2NII(1)							   User Commands						     PARREC2NII(1)

NAME

       parrec2nii - convert PARREC image to NIfTI

SYNOPSIS

       parrec2nii [OPTIONS] <PAR files>

DESCRIPTION

       PAR/REC to NIfTI converter

OPTIONS

       --version
	      show program's version number and exit

       -h, --help
	      show this help message and exit

       -v, --verbose
	      Make some noise.

       -o OUTDIR, --output-dir=OUTDIR
	      Destination directory for NIfTI files. Default: current directory.

       -c, --compressed
	      Whether to write compressed NIfTI files or not.

       --origin=ORIGIN
	      Reference  point	of  the q-form transformation of the NIfTI image. If 'scanner' the (0,0,0) coordinates will refer to the scanner's
	      iso center. If 'fov', this coordinate will be the center of the recorded volume (field of view). Default: 'scanner'.

       --minmax=MINMAX
	      Mininum and maximum settings to be stored in the NIfTI header. If any of them is set to 'parse', the scaled data is scanned for  the
	      actual  minimum  and  maximum. To bypass this potentially slow and memory intensive step (the data has to be scaled and fully loaded
	      into memory), fixed values can be provided as spaceseparated pair, e.g. '5.4 120.4'. It is possible to set a fixed minimum  as  scan
	      for the actual maximum (and vice versa). Default: 'parse parse'.

       --store-header
	      If set, all information from the PAR header is stored in an extension of the NIfTI file header. Default: off

       --scaling=SCALING
	      Choose data scaling setting. The PAR header defines two different data scaling settings: 'dv' (values displayed on console) and 'fp'
	      (floating point values). Either one can be chosen, or scaling can be disabled completely ('off').  Note  that  neither  method  will
	      actually scale the data, but just store the corresponding settings in the NIfTI header. Default: 'dv'

parrec2nii 1.2.2						     June 2012							     PARREC2NII(1)