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Full Discussion: Grouping matches by cols
Top Forums Shell Programming and Scripting Grouping matches by cols Post 302234467 by cfajohnson on Tuesday 9th of September 2008 07:33:25 PM
Old 09-09-2008
Quote:
Originally Posted by gbalsu
Dear all
I have a large file w. ~ 10 million lines.
The first two cols have matching partners.
For example:
A A
A B
B B

or

A A
B A
B B

The matches may be separated by an unknown number of lines.

My intention is to group them and add a "group" value in the last col.

For example

A A A
A B A
B B A

or

A A A
B A A
B B A

How do you determine the group value? Why is the third line not B B B?
Quote:
Rest assured that only one of A B and B A will be present and not both.
Any help will be highly appreciated.
A may have matches in addition to B and any number of of them. But in all cases I would like to name the group with the first partner of the first instance, i.e. A in this case.

It would be helpful if you provided more examples from the file.

It might also help if you posted some real data in addition to the abbreviated, single-letter data.
 

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SHELL-QUOTE(1p) 					User Contributed Perl Documentation					   SHELL-QUOTE(1p)

NAME
shell-quote - quote arguments for safe use, unmodified in a shell command SYNOPSIS
shell-quote [switch]... arg... DESCRIPTION
shell-quote lets you pass arbitrary strings through the shell so that they won't be changed by the shell. This lets you process commands or files with embedded white space or shell globbing characters safely. Here are a few examples. EXAMPLES
ssh preserving args When running a remote command with ssh, ssh doesn't preserve the separate arguments it receives. It just joins them with spaces and passes them to "$SHELL -c". This doesn't work as intended: ssh host touch 'hi there' # fails It creates 2 files, hi and there. Instead, do this: cmd=`shell-quote touch 'hi there'` ssh host "$cmd" This gives you just 1 file, hi there. process find output It's not ordinarily possible to process an arbitrary list of files output by find with a shell script. Anything you put in $IFS to split up the output could legitimately be in a file's name. Here's how you can do it using shell-quote: eval set -- `find -type f -print0 | xargs -0 shell-quote --` debug shell scripts shell-quote is better than echo for debugging shell scripts. debug() { [ -z "$debug" ] || shell-quote "debug:" "$@" } With echo you can't tell the difference between "debug 'foo bar'" and "debug foo bar", but with shell-quote you can. save a command for later shell-quote can be used to build up a shell command to run later. Say you want the user to be able to give you switches for a command you're going to run. If you don't want the switches to be re-evaluated by the shell (which is usually a good idea, else there are things the user can't pass through), you can do something like this: user_switches= while [ $# != 0 ] do case x$1 in x--pass-through) [ $# -gt 1 ] || die "need an argument for $1" user_switches="$user_switches "`shell-quote -- "$2"` shift;; # process other switches esac shift done # later eval "shell-quote some-command $user_switches my args" OPTIONS
--debug Turn debugging on. --help Show the usage message and die. --version Show the version number and exit. AVAILABILITY
The code is licensed under the GNU GPL. Check http://www.argon.org/~roderick/ or CPAN for updated versions. AUTHOR
Roderick Schertler <roderick@argon.org> perl v5.8.4 2005-05-03 SHELL-QUOTE(1p)
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