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Top Forums UNIX for Dummies Questions & Answers File organization, /bin and /src Post 302224954 by css136 on Thursday 14th of August 2008 08:40:19 AM
Old 08-14-2008
Hi, thanks for the replies. I'll try to be more specific because I think my first post was quite vague. Sorry.

In my home directory, I have the folders ~/bin and ~/src. When I compile a program such as BLAST from source code, it seems that I should keep the BLAST folder in the ~/src directory because it contains the program's source code. Within the BLAST directory, there is a ./bin folder that contains the executables. I was simply wondering -- is it common practice to move these to my ~/bin directory, to make links to them in my ~/bin directory, or to just keep them in my ~/src directory and to execute them from there? If the answer to this question varies depending on the program, I'll just try to do whatever seems best. It is not very important, but I was just curious what the standard practice is in the Unix world. Thanks!
 

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WHEREIS(1)						      General Commands Manual							WHEREIS(1)

NAME
whereis - locate the binary, source, and manual page files for a command SYNOPSIS
whereis [ -bmsu ] [ -BMS directory... -f ] filename ... DESCRIPTION
whereis locates source/binary and manuals sections for specified files. The supplied names are first stripped of leading pathname compo- nents and any (single) trailing extension of the form .ext, for example, .c. Prefixes of s. resulting from use of source code control are also dealt with. whereis then attempts to locate the desired program in a list of standard Linux places. OPTIONS
-b Search only for binaries. -m Search only for manual sections. -s Search only for sources. -u Search for unusual entries. A file is said to be unusual if it does not have one entry of each requested type. Thus `whereis -m -u *' asks for those files in the current directory which have no documentation. -B Change or otherwise limit the places where whereis searches for binaries. -M Change or otherwise limit the places where whereis searches for manual sections. -S Change or otherwise limit the places where whereis searches for sources. -f Terminate the last directory list and signals the start of file names, and must be used when any of the -B, -M, or -S options are used. EXAMPLE
Find all files in /usr/bin which are not documented in /usr/man/man1 with source in /usr/src: example% cd /usr/bin example% whereis -u -M /usr/man/man1 -S /usr/src -f * FILES
/{bin,sbin,etc} /usr/{lib,bin,old,new,local,games,include,etc,src,man,sbin, X386,TeX,g++-include} /usr/local/{X386,TeX,X11,include,lib,man,etc,bin,games,emacs} SEE ALSO
chdir(2V) BUGS
Since whereis uses chdir(2V) to run faster, pathnames given with the -M, -S, or -B must be full; that is, they must begin with a `/'. whereis has a hard-coded path, so may not always find what you're looking for. 8 May 1994 WHEREIS(1)
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