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Shell Programming and Scripting
using uniq and awk??
Post 302196225 by amatuer_lee_3 on Saturday 17th of May 2008 07:58:21 AM
05-17-2008
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LEARN ABOUT DEBIAN
libscanout
LIBSCANOUT(1e) EMBOSS Manual for Debian LIBSCANOUT(1e) NAME
libscanout - Reads a DHF file and writes a file of top-scoring Classes, Folds and Superfamilies. SYNOPSIS
libscanout -dhfinfile infile -outfile outfile libscanout -help DESCRIPTION
libscanout is a command line program from EMBOSS ("the European Molecular Biology Open Software Suite"). It is part of the "Protein:3D Structure" command group(s). OPTIONS
Input section -dhfinfile infile This option specifies the location of the DHF file (domain hits file) (input). A 'domain hits file' contains database hits (sequences) with domain classification information, in FASTA or EMBL formats. The hits are relatives to a SCOP or CATH family and are found from a search of a sequence database. Files containing hits retrieved by PSIBLAST are generated by using SEQSEARCH. Required section Output section -outfile outfile This option specifies the location of the summary file (output). The summary file contains lists of domain Classes, Superfamilies and Families rank-ordered on the basis of score (highest-scoring first). BUGS
Bugs can be reported to the Debian Bug Tracking system (http://bugs.debian.org/emboss), or directly to the EMBOSS developers (http://sourceforge.net/tracker/?group_id=93650&atid=605031). SEE ALSO
libscanout is fully documented via the tfm(1) system. AUTHOR
Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org> Wrote the script used to autogenerate this manual page. COPYRIGHT
This manual page was autogenerated from an Ajax Control Definition of the EMBOSS package. It can be redistributed under the same terms as EMBOSS itself. DOMAINATRIX 0.1.0+20100721 08/11/2010 LIBSCANOUT(1e)