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Top Forums Shell Programming and Scripting omitting lines from file A that are in file B Post 302168733 by drl on Tuesday 19th of February 2008 09:39:22 AM
Old 02-19-2008
Hi.
Quote:
Originally Posted by gneen
I've got file A with (say) 1M lines in it ... ascii text, space delimited ...

I've got file B with (say) 10M lines in it ... same structure.

I want to remove any lines from A that appear (identically) in B and print the remaining (say) 900K lines ...
If the original order is not important you could sort both files, and use comm, where you can choose a list that contains lines unique to one file, unique to the other, common to both, or any combination of those ... cheers, drl
 

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COMM(1) 							   User Commands							   COMM(1)

NAME
comm - compare two sorted files line by line SYNOPSIS
comm [OPTION]... FILE1 FILE2 DESCRIPTION
Compare sorted files FILE1 and FILE2 line by line. With no options, produce three-column output. Column one contains lines unique to FILE1, column two contains lines unique to FILE2, and column three contains lines common to both files. -1 suppress column 1 (lines unique to FILE1) -2 suppress column 2 (lines unique to FILE2) -3 suppress column 3 (lines that appear in both files) --check-order check that the input is correctly sorted, even if all input lines are pairable --nocheck-order do not check that the input is correctly sorted --output-delimiter=STR separate columns with STR --help display this help and exit --version output version information and exit Note, comparisons honor the rules specified by `LC_COLLATE'. EXAMPLES
comm -12 file1 file2 Print only lines present in both file1 and file2. comm -3 file1 file2 Print lines in file1 not in file2, and vice versa. AUTHOR
Written by Richard M. Stallman and David MacKenzie. REPORTING BUGS
Report comm bugs to bug-coreutils@gnu.org GNU coreutils home page: <http://www.gnu.org/software/coreutils/> General help using GNU software: <http://www.gnu.org/gethelp/> Report comm translation bugs to <http://translationproject.org/team/> COPYRIGHT
Copyright (C) 2011 Free Software Foundation, Inc. License GPLv3+: GNU GPL version 3 or later <http://gnu.org/licenses/gpl.html>. This is free software: you are free to change and redistribute it. There is NO WARRANTY, to the extent permitted by law. SEE ALSO
join(1), uniq(1) The full documentation for comm is maintained as a Texinfo manual. If the info and comm programs are properly installed at your site, the command info coreutils 'comm invocation' should give you access to the complete manual. GNU coreutils 8.12.197-032bb September 2011 COMM(1)
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