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Top Forums UNIX for Advanced & Expert Users how to take out common of two lines in a file Post 302146557 by jam_ali49 on Wednesday 21st of November 2007 06:11:45 AM
Old 11-21-2007
thanks smiling dragon

I thank u for taking interest in this problem.

The input file is like this, first whitespace is tab and subsequent are single spaces.
Here are 3 lines of the file.

PFA0165c ctg_6843
PFA0335w ctg_6843 ctg_6871 ctg_6977 ctg_6654 ctg_7052 ctg_6899 ctg_6840 ctg_7202 ctg_6638
PFA0155c ctg_6877 ctg_7169 ctg_7179 ctg_6843 ctg_6871

I want comparison like this

Compare line1 with line 2 and take out the common
Compare line 2 with line 3 and take out tthe common
Compare line 3 with line 4 and take out the common
- - - - - - - - - - - - - - - - - -- - -- -- -- -
Compare line (n-1) with line n and take out the common


First field of every line is unique and it is tab separated from rest of the line, so in awk u can declare an array a[$1]=$2 with FS="\t". So the only problem is to compare $2 of two adjacent lines.

Now I want to print out
first field of line 1 and line 2 and the common
first field of line 2 and line 3 and the common
- - - - - - - - - - - - - - - - - -- - -- --
first field of line (n-1) and line n and the common


Hence the output will be like this
PFA0165c PFA0335w ctg_6843
PFA0335w PFA0155c ctg_6843 ctg_6871
 

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LOGPROF.CONF(5) 						     AppArmor							   LOGPROF.CONF(5)

NAME
logprof.conf - configuration file for expert options that modify the behavior of the AppArmor logprof(1) program. DESCRIPTION
The logprof(1) program can be configured to have certain default behavior by the contents of logprof.conf. The [qualifiers] section lists specific programs that should have a subset of the full ix/px/ux list when asking what mode to execute it using. Since creating a separate profile for /bin/bash is dangerous, we can specify that for /bin/bash, only (I)nherit, (U)nconstrained, and (D)eny should be allowed options and only those will show up in the prompt when we're asking about adding that to a profile. Likewise, if someone currently exec's /bin/mount in ix or px mode, things won't work, so we can provide only (U)nconstrained and (D)eny as options. And certain apps like grep, awk, sed, cp, and mkdir should always inherit the parent profile rather than having their own profile or running unconfined, so for them we can specify that only (I)nherit and (D)eny are the allowed options. Any programs that are not listed in the qualifiers section get the full (I)nherit / (P)rofile / (U)nconstrained / (D)eny option set. If the user is doing something tricky and wants different behavior, they can tweak or remove the corresponding line in the conf file. The [defaulthat] section lists changehat-aware programs and what hat logprof(1) will collapse the entries to for that program if the user specifies that the access should be allowed, but should not have it's own hat. The [globs] section allows modification of the logprof rule engine with respect to globbing suggestions that the user will be prompted with. The format of each line is-- "<perl glob> = <apparmor glob>". When logprof(1) asks about a specific path, if the perl glob matches the path, it replaces the part of the path that matched with the corresponding apparmor glob and adds it to the list of globbing suggestions. Lines starting with # are comments and are ignored. EXAMPLE
[qualifiers] # things will very likely be painfully broken if bash has it's own profile /bin/bash = iu # mount doesn't work if it's confined /bin/mount = u # these helper utilities should inherit the parent profile and # shouldn't have their own profiles /bin/awk = i /bin/grep = i /bin/sed = i [defaulthat] /usr/sbin/sshd = EXEC /usr/sbin/httpd2 = DEFAULT_URI /usr/sbin/httpd2-prefork = DEFAULT_URI [globs] # /foo/bar/lib/libbaz.so -> /foo/bar/lib/lib* /lib/lib[^/]+so[^/]*$ = /lib/lib*so* # strip kernel version numbers from kernel module accesses ^/lib/modules/[^/]+/ = /lib/modules/*/ # strip pid numbers from /proc accesses ^/proc/d+/ = /proc/*/ BUGS
None. Please report any you find to bugzilla at <http://bugzilla.novell.com>. SEE ALSO
apparmor(7), apparmor.d(5), enforce(1), change_hat(2), complain(1), logprof(1), genprof(1), and <http://forge.novell.com/modules/xfmod/project/?apparmor>. NOVELL
/SUSE 2007-04-03 LOGPROF.CONF(5)
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