Compare lists of files Post: 24791

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compare 2 very large lists of different length

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Compare 2 lists using a full and/or partial match at beginning of line?

hello all, I wonder if anybody might be able to help with this. I have file 1 and file2. Both files may contain thousands of lines that have variable contents. file1 234GH 5234BTW 89er 678tfg 234 234YT tfg456 wert 78gt gh23444

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[Python] Compare 2 lists

Hello, I'm new to the python programming, and I have a question. I have to write a program that prints a receipt for a restaurant. The input is a list which looks like: product1 product3 product8 .... In the other input file there is a list which looks like: product1 coffee 5,00...

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Compare Only "File Names" in 2 Files with file lists having different directory structure

I have a tar arcive arch_all.tar.gz and 4 batched tar archive . These batches are supposed to have all the files form arch1.all.tar.gz arch1_batch1.tar.gz arch1_batch2.tar.gz arch1_batch3.tar.gz arch1_batch4.tar.gz my issue is that the directory structure in "arch_all.tar.gz" is...

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vcf-compare

VCF-COMPARE(1)							   User Commands						    VCF-COMPARE(1)

NAME

       vcf-compare - compare bgzipped and tabix indexed VCF files

SYNOPSIS

       compare-vcf [OPTIONS] file1.vcf file2.vcf ...

DESCRIPTION

       About: Compare bgzipped and tabix indexed VCF files. (E.g. bgzip file.vcf; tabix -p vcf file.vcf.gz)

OPTIONS

       -c, --chromosomes <list|file>
	      Same as -r, left for backward compatibility. Please do not use as it will be dropped in the future.

       -d, --debug
	      Debugging information. Giving the option multiple times increases verbosity

       -H, --cmp-haplotypes
	      Compare haplotypes, not only positions

       -m, --name-mapping <list|file>
	      Use  with -H when comparing files with differing column names. The argument to this options is a comma-separated list or one mapping
	      per line in a file. The names are colon separated and must appear in the same order as the files on the command line.

       -R, --refseq <file>
	      Compare the actual sequence, not just positions. Use with -w to compare indels.

       -r, --regions <list|file>
	      Process the given regions (comma-separated list or one region per line in a file).

       -s, --samples <list>
	      Process only the listed samples. Excluding unwanted samples may increase performance considerably.

       -w, --win <int>
	      In repetitive sequences, the same indel can be called at different positions. Consider records this far apart as matching (be  it  a
	      SNP or an indel).

       -h, -?, --help
	      This help message.

vcf-compare 0.1.5						     July 2011							    VCF-COMPARE(1)

10 More Discussions You Might Find Interesting

1. Shell Programming and Scripting

How to get the files lists

Discussion started by: nmadhuhb

2. UNIX for Dummies Questions & Answers

compare 2 very large lists of different length

Discussion started by: uiop44

3. Shell Programming and Scripting

Shell Script to Create non-duplicate lists from two lists

Discussion started by: mlv_99

4. UNIX for Dummies Questions & Answers

Compare 2 lists using a full and/or partial match at beginning of line?

Discussion started by: Garrred