Sponsored Content
Full Discussion: Help in awk/bash
Top Forums Shell Programming and Scripting Help in awk/bash Post 302749573 by DGPickett on Friday 28th of December 2012 03:48:58 PM
Old 12-28-2012
You can 'join' file 1.txt to each of the [a-h].txt in a 'for' loop, and process the 'for' output piped to shell 'while read'. The file name will be in the 'for' variable and the file columns will be all present in the 'read' variables. You have to 'sort' every file on the key column using a 'binary' sort (export LC_ALL=C, not a numeric sort). Hopefully the original line order is not critical, else number the lines in a new field. While you can join using a pile of awk or shell commands, this is cleaner.

Man Page for join (opensolaris Section 1) - The UNIX and Linux Forums

Man Page for sort (all Section 1) - The UNIX and Linux Forums
This User Gave Thanks to DGPickett For This Post:
 

10 More Discussions You Might Find Interesting

1. Shell Programming and Scripting

BASH with AWK

Hello, I have a file.txt with 20000 lines and 2 columns each which consists of current_filename and new_filename . I want to create a script to find files in a directory with current_filename and move it to new folder with new_filename. Could you please help me how to do that?? ... (2 Replies)
Discussion started by: narasimhulu
2 Replies

2. Shell Programming and Scripting

Is there any better way for sorting in bash/awk

Hi, I have a file which is:- 1 6 4 8 2 3 2 1 9 3 2 1 3 3 5 6 3 1 4 9 7 8 2 3 I would like to sort from field $2 to field $6 for each of the line to:- 1 2 3 4 6 8 2 1 1 2 3 9 3 1 3 3 5 6 4 2 3 7 8 9 I came across this Arrays on example 26-6. But it is much complicated. I am... (7 Replies)
Discussion started by: ahjiefreak
7 Replies

3. Shell Programming and Scripting

awk bash help

Hi, I'm trying to read a file containing lines with spaces in them. The inputfile looks like this ------------------------------ Command1 arg1 arg2 Command2 arg5 arg6 arg7 ------------------------------- The shell code looks like this... lines=`awk '{ print }' inputfile` ... (2 Replies)
Discussion started by: a-gopal
2 Replies

4. Shell Programming and Scripting

scripting help with bash and awk

I'm trying to reformat some tide information into a useable format and failing. Input file is.... 4452 CHENNAI (MADRAS) 13°06'N, 80°18'E India East Coast 01 June 2009 UT(GMT) Data Area 3. Indian Ocean (northern part) and Red Sea to Singapore 01/06/2009 00:00 0.7 m 00:20 0.7 m 00:40... (3 Replies)
Discussion started by: garethsays
3 Replies

5. UNIX for Dummies Questions & Answers

Help with BASH/AWK queries ....

Hi Everyone, I have an input file in the following format: score.file1.txt contig00045 length=566 numreads=19 1047 0.0 contig00055 length=524 numreads=7 793 0.0 contig00052 length=535 numreads=10 607 e-176 contig00072 length=472 numreads=46 571 e-165... (8 Replies)
Discussion started by: Fahmida
8 Replies

6. Shell Programming and Scripting

AWK/Bash script

I would like to write a script to extend this command to a general case: BEGIN {s_0=0;n_0=0}{n_0++;s_0+=($51-$1)^2}END {print sqrt(s_0/n_0)} i.e. so that BEGIN {s_0=0;n_0=0}{n_0++;s_0+=($51-$1)^2}END {print sqrt(s_0/n_0)} BEGIN {s_1=0;n_1=0}{n_1++;s_1+=($51-$2)^2}END {print... (3 Replies)
Discussion started by: chrisjorg
3 Replies

7. UNIX for Dummies Questions & Answers

Help in awk/bash

Hi, I am also a newbie in awk and trying to find solution of my problem. I have one reference file 1.txt with 2 columns and I want to search other 10 files (a.txt, b.txt......h.txt each with 5 columns) corresponding to the values of 2nd column from 1.txt. If the value from 2nd column from 1.txt... (0 Replies)
Discussion started by: bioinfo
0 Replies

8. Shell Programming and Scripting

Help in awk/bash

Hi, I have two files: atom.txt and g.txt atom.txt has multiple patterns but I am showing only two patterns each ending with ENDMDL: ATOM 1 N SER A 1 35.092 83.194 140.076 1.00 0.00 N ATOM 2 CA SER A 1 35.216 83.725 138.725 1.00 0.00 C TER ENDMDL ATOM 1 N SER A 1 35.683 81.326 139.778 1.00... (11 Replies)
Discussion started by: bioinfo
11 Replies

9. Shell Programming and Scripting

Returning a value from awk to bash

Hi I am a newbie starting bash and I have a simple need to return the result of an operation from awk to bash. basically I want to use awk to tell me if "#" exists in a string, and then back in bash, i want to do an IF statement on this return in order to do other things. In my bash shell I... (2 Replies)
Discussion started by: oahmad
2 Replies

10. UNIX for Dummies Questions & Answers

New problem with awk using bash

Hi! I have a new problem with awk, this time I think is because I'm using it in bash and I don't know how to put the valor of the variable in awk. Here is the code: #!/bin/bash for i in 1 2 3 4 5 do a=$i b=$ awk '$1>=a&&$1<=b {print $1,$2,$3}'>asdf test... (3 Replies)
Discussion started by: florpi
3 Replies
TABLIX(1)						       Tablix User's Manual							 TABLIX(1)

NAME
tablix2_plot - Tablix data plotter SYNOPSIS
tablix2_plot command [ options ] DESCRIPTION
Tablix is a powerful free software kernel for solving general timetabling problems. It uses a coarse-grained parallel genetic algorithm in combi- nation with other techniques to construct sensible timetables from XML formatted problem descriptions. Tablix can run on a single host as well as on a heterogeneous parallel virtual machine using PVM3. tablix2_plot can be used to plot various types of population convergence graphs using data in files usually named conv0.txt , conv1.txt , ... Tablix will save convergence data into these files if it was compiled with the --enable-conv option. These graphs can be useful for example to get a rough estimate of time required to solve a particular problem (note that tablix2_plot can be safely used with files that are still written to by a running Tablix session). Graphs are plotted with gnuplot using the default output terminal (which is in most cases a X11 display). Encapsulated postscript files can be obtained by setting EPSOUTPUT environment variable. Scalable vector graphics files can be obtained by setting SVGOUTPUT environment variable. The contents of these variables are used by tablix2_plot as a file name to write to. OPTIONS
tablix2_plot --conv-fitness [ --scale SCALE ] [ PREFIX ] ... Plot population convergence graph using convergence data in files conv*.txt in the current directory. One line is drawn for each computing node. It shows the fitness value of the best timetable versus generation count. Use the PREFIX option, if you used the -o option with Tablix. You can use more than one PREFIX option to plot multiple convergence graphs in one window. Use the SCALE option to adjust the vertical scale. tablix2_plot --fit-fitness [ --scale SCALE ] [ PREFIX ] ... Same as --conv-fitness above, except that an exponential function is also drawn on the graph using least squares fitting. This can be used to get a rough estimate of the time required to find a solution. The SCALE parameter is used to adjust the horizontal scale in this case. tablix2_plot --functions [ --scale SCALE ] CONVFILE Plot the return value of each fitness function versus generation count. Return values of mandatory fitness functions are plotted with thicker lines. CONVFILE must be a file with Tablix population convergence data (usually named conv*.txt ). Use the SCALE option to adjust the vertical scale. EXAMPLES
If Tablix was started with the following command: tablix2 -o u1_ sample.xml then the following command plots the population convergence graph: tablix2_plot --conv-fitness u1_ Encapsulated postscript version of the same graph can be obtained with the following command in bash shell: EPSOUTPUT="graph.eps" tablix2_plot --conv-fitness u1_ To see which mandatory restriction is preventing Tablix from finding the solution, use the per module plot, possibly with a small vertical scale: tablix2_plot --functions --scale 100 u1_conv0.txt BUGS
In addition to gnuplot tablix2_plot utility depends on a number of common UNIX programs (mktemp, grep, sed, awk, ...) that may not be available on all systems. The script is not currently capable of properly detecting if any required programs are missing. AUTHOR
Tomaz Solc (tomaz.solc@tablix.org) SEE ALSO
tablix2(1), Tablix User's Manual, Tablix modules HOWTO, Tablix on Morphix HOWTO Tomaz Solc 2005-09-03 TABLIX(1)
All times are GMT -4. The time now is 07:35 AM.
Unix & Linux Forums Content Copyright 1993-2022. All Rights Reserved.
Privacy Policy