10 More Discussions You Might Find Interesting
1. Shell Programming and Scripting
I have this fastq file:
@M04961:22:000000000-B5VGJ:1:1101:9280:7106 1:N:0:86
GGGGGGGGGGGGCATGAAAACATACAAACCGTCTTTCCAGAAATTGTTCCAAGTATCGGCAACAGCTTTATCAATACCATGAAAAATATCAACCACACCA
+test-1
GGGGGGGGGGGGGGGGGCCGGGGGFF,EDFFGEDFG,@DGGCGGEGGG7DCGGGF68CGFFFGGGG@CGDGFFDFEFEFF:30CGAFFDFEFF8CAF;;8... (10 Replies)
Discussion started by: Xterra
10 Replies
2. Shell Programming and Scripting
Hi,
Im using sed on an AIX machine. I am trying to change the 137-139 characters if they are a ' 36'/'000' to a '036'. The positions that need to be changed are fixed.
the source data that I have is$cat v.txt
4000422985400050462239065593606500000007422985707771046154054910075641MC0318AMWAY... (9 Replies)
Discussion started by: dsid
9 Replies
3. Shell Programming and Scripting
Hi,
I am using sed command to replace following line in gz file-
sed -n 's/""COS_12_TM_1" ( 1101110101001001010011110100000010110100010010000000100000000010XX010000000 )"/""COS_12_TM_1" ( 110111010100100101001111MM00000010110100010010000000100000000010XX010000000 )"/g' filename.gz
$x=... (4 Replies)
Discussion started by: Preeti Chandra
4 Replies
4. Shell Programming and Scripting
Greetings..
getting the error while execution of the script, correct where i am missing
#!/bin/bash
DATE=`date +%Y-%m-%d:::%H:%M`
HOSTNAME=`hostname`
TXT="/log/temp.txt"
LOGPATH="/log1/commanlogs/"
IP=`/sbin/ifconfig | grep -i inet| head -n1| awk '{print $2}'| awk -F : '{print $2}'`... (7 Replies)
Discussion started by: manju98458
7 Replies
5. Shell Programming and Scripting
Hi,
I have a xml file (Config.xml)
<Header name="" TDate="" PDate="">
<Config>
{"config" { "Nation" "Pri:|Sec:"}}
</Config>
</Header>
Now I wanted to printed all the strings between "". I tried the following
cat Config.xml | sed -n 's/.*\.*//p'
... (8 Replies)
Discussion started by: vivek_damodaran
8 Replies
6. Shell Programming and Scripting
sed -e "s// /g" old.txt > new.txt
While I do know some control characters need to be escaped, can normal characters also be escaped and still work the same way? Basically I do not know all control characters that have a special meaning, for example, ?, ., % have a meaning and have to be escaped... (11 Replies)
Discussion started by: ijustneeda
11 Replies
7. UNIX for Dummies Questions & Answers
I am trying to analyse a large file of sequencing data, example of first 10 lines below,
@HWUSI-EAS656_0044_FC:7:1:2447:1039#GCAATT/1
GNCTATGGCTTGCCGGGCTCAGGGAAGACAATCATAGCCATGAAAATCATGGAAAAGATCAGAAAAACATTTCAA
+HWUSI-EAS656_0044_FC:7:1:2447:1039#GCAATT/1... (1 Reply)
Discussion started by: Adeleh
1 Replies
8. Shell Programming and Scripting
Input:
ghw//yw/hw///??u
How can i count the slashes("/") using sed? (13 Replies)
Discussion started by: cola
13 Replies
9. Shell Programming and Scripting
Okay, title is kind of confusion, but basically, I have a lot of scripts on a server that I need to replace a ps command, however, the new ps command I'm trying to replace the current one with pipes to sed at one point. So now I am attempting to create another script that replaces that line.
... (1 Reply)
Discussion started by: cbo0485
1 Replies
10. Shell Programming and Scripting
I started with this:
counter1=1
cp file.txt file_${counter1}.tmp
while read name1
do
echo $name1
counter2=`expr $counter1 + 1`
sed /'${name1}'/d file_${counter1}.txt > file_${counter2}.txt
counter1=`expr $counter1 + 1`
done < source.txtsource.txt contains the... (1 Reply)
Discussion started by: lakanino
1 Replies