9 More Discussions You Might Find Interesting
1. UNIX for Beginners Questions & Answers
Hi there,
I have data with similar structure as this:
CHR START-SNP END-SNP REF ALT PATIENT1 PATIENT2 PATIENT3 PATIENT4
chr1 69511 69511 A G homo hetero homo hetero
chr2 69513 69513 T C . hetero homo hetero
chr3 69814 69814 G C . . homo homo
chr4 69815 69815 C A hetero . . hetero
is... (10 Replies)
Discussion started by: daashti
10 Replies
2. Shell Programming and Scripting
Hello All,
Here is am trying to get maximum value of third field depending on
first,second and fourth fields with awk command . delimeter is pipe(|) .
input
0221|09|14.25|aaa
0221|09|44.27|aaa
0221|09|44.33|aaa
0221|09|44.53|bbb
0221|09|34.32|bbb
0221|09|37.13|bbb... (5 Replies)
Discussion started by: sayami00
5 Replies
3. Shell Programming and Scripting
In the below I am trying to use awk to match all the $13 values in input, which is tab-delimited,
that are in $1 of gene which is just a single column of text.
However only the line with the greatest $9 value in input needs to be printed.
So in the example below all the MECP2 and LTBP1... (0 Replies)
Discussion started by: cmccabe
0 Replies
4. Shell Programming and Scripting
In the below awk I am trying output to one file those lines that match between $2,$3,$4 of file1 and file2 with the count in (). I am also trying to output those lines that are missing between $2,$3,$4 of file1 and file2 with the count of in () each. Both input files are tab-delimited, but the... (7 Replies)
Discussion started by: cmccabe
7 Replies
5. Shell Programming and Scripting
Trying to combine strings that are a partial match to another in $1 (usually below it). If a match is found than the $2 value is added to the $2 value of the match and the $3 value is added to the $3 value of the match. I am not sure how to do this and need some expert help. Thank you :).
file
... (2 Replies)
Discussion started by: cmccabe
2 Replies
6. Shell Programming and Scripting
Hi
I would like to know if it is possible to sum some specific fields.
I have this
x;x;x;x;x;x;x;x;467,390,611 Bytes;0.435291 GB;0.062247 GB;0.373045 GB;11,225;157
a;a;a;a;a;a;a;a;13,805,156,846 Bytes;12.857054 GB;1.838559 GB;11.018495 GB;151,063;18,933
b;b;b;b;b;b;b;b;232,797,478,723... (5 Replies)
Discussion started by: nakaedu
5 Replies
7. Shell Programming and Scripting
Friends,
This is what I need:
I will pass a CSV file as an input, and I want my shell to be reading that CSV file, and based on the parameters it should generate SQLs and write those SQL in a different file in the same location.
I'm new to Shell scripting. I'm currently working on a... (25 Replies)
Discussion started by: Ram.Math
25 Replies
8. Shell Programming and Scripting
Friends,
This is what I need:
I will pass a CSV file as an input, and I want my shell to be reading that CSV file, and based on the parameters it should generate SQLs and write those SQL in a different file in the same location.
I'm new to Shell scripting. I'm currently working on a... (1 Reply)
Discussion started by: Ram.Math
1 Replies
9. UNIX for Dummies Questions & Answers
Can someone help me again, I think with awk? I have a file with 4 columns (pipe-delimited):
I just want to convert the last field so that e1 is now 'message 1', e2 is 'message 2', e0 is 'message 3', etc. I don't want to change any other columns because the e0-e10 code may appear as part of a... (4 Replies)
Discussion started by: giannicello
4 Replies