8 More Discussions You Might Find Interesting
1. Shell Programming and Scripting
In the below bash processes substitution, if there are 3 files in a directory /home/cmccabe/medex.logs/analysis.log, the filename variable is set to where these files are located.
The code does execute, the problem is that if there is a renamed file in the output directory below, it gets... (0 Replies)
Discussion started by: cmccabe
0 Replies
2. Shell Programming and Scripting
Hi,
Below is my input file:
Long list of significant figure
1.757E-4
7.51E-3
5.634E-5
.
.
.
Desired output file:
0.0001757
0.00751
0.00005634
.
.
. (10 Replies)
Discussion started by: perl_beginner
10 Replies
3. Shell Programming and Scripting
Hello,
I am searching large (~25gb) DNA sequence data in fasta short read format:
>ReadName
ACGTACGTACGT...
for short tandem repeats, meaning instances of any 2-6 character based run that are repeated in tandem a number of times given as an input variable. Seems like a reasonably simple... (3 Replies)
Discussion started by: ljk
3 Replies
4. Shell Programming and Scripting
Hi all,
I want to remove the remove bracket sign ( ) and put in the separate column I also want to remove the repeated entry like in first row in below input (PA156) is repeated
ESR1 (PA156) leflunomide (PA450192) (PA156) leflunomide (PA450192)
CHST3 (PA26503) docetaxel... (4 Replies)
Discussion started by: manigrover
4 Replies
5. Shell Programming and Scripting
Hi, all.
Here's the problem:
sed '/FOO/,/BAR/p'
That should print anything between FOO and BAR, right?
Well, let's say I have file.txt that contains just one line "how are you today?".
Then I run something like the above and get:
$ sed '/how/,/today/p' file.txt
how are you... (9 Replies)
Discussion started by: pereyrax
9 Replies
6. UNIX for Dummies Questions & Answers
if I wanted to know if the word DOG(followed by several random numbers) appears in col 1, how many times will that same word DOG* appeared in col 2? This is a very large file
Thanks! (7 Replies)
Discussion started by: verse123
7 Replies
7. Shell Programming and Scripting
Hi, I need a little help here. I am exporting user info from a PSQL database and everything is working with the exception of this:
10029008:dsAuthMethodStandard\:dsAuthClearText:classword:10029008:2004:10029008:10029008:/home/student/1002/90/08:10029008
It is putting a colon right before the... (1 Reply)
Discussion started by: Stud33
1 Replies
8. UNIX for Dummies Questions & Answers
I have a text file that I want to search for repeated lines and print those lines. These would be lines in the file that appear more than once. Is there a way to do this?
Thanks (4 Replies)
Discussion started by: aarondesk
4 Replies