10 More Discussions You Might Find Interesting
1. Shell Programming and Scripting
Hi all, I'm pretty much a newbie to UNIX. I would appreciate any help with UNIX coding on comparing two large csv files (greater than 10 GB in size), and output a file with matching columns.
I want to compare file1 and file2 by 'id' and 'chain' columns, then extract exact matching rows'... (5 Replies)
Discussion started by: bkane3
5 Replies
2. UNIX for Dummies Questions & Answers
Hi,
I have a text file where some of the values in columns are missing:
Input:
QhFudW3dKSYL2NTQUA 1 11133999-11134048
uhIp9KxB6USIy16CEY 1 11126760-11126774
11126775-11126805
11128065-11128068
6epeZ6CTNW4Au8uXys 1 24480823-24480872
Tp3nvutucBZ13CjuXc 1 155204870-155204891... (3 Replies)
Discussion started by: evelibertine
3 Replies
3. UNIX for Dummies Questions & Answers
How do you fill empty cells that do not have any data in them with "X" in a tab delimited text file? Thanks! (4 Replies)
Discussion started by: evelibertine
4 Replies
4. UNIX for Dummies Questions & Answers
I have a text file which includes empty columns with missing values. I want to fill the empty columns with the character "X". How do I go about doing that? Thanks! (1 Reply)
Discussion started by: evelibertine
1 Replies
5. UNIX for Dummies Questions & Answers
Hello all,
I have a file which is tab separated like that:
PHE_205_A TIP_127_W ARG_150_B
MET_1150_A TIP_12_W VAL_11_B
GLU_60_A TIP_130_W ARG_143_B
LEU_1033_A TIP_203_W ARG_14_B
SER_1092_A TIP_203_W
THR_1090_A TIP_203_W
SER_1092_A TIP_25_W ... (6 Replies)
Discussion started by: TheTransporter
6 Replies
6. UNIX for Dummies Questions & Answers
Hi,
I have a file with fixed number of columns (total 58 columns) delimeted by pipe (|). Due to a bug in the application the export file does not come with fixed number of columns. The missing data columns are being replaced by blank in the output file. In one line I can have 25 columns (33... (1 Reply)
Discussion started by: yale_work
1 Replies
7. UNIX for Dummies Questions & Answers
I have a text file that looks like the following:
rs529715 CFD
rs1550758 CIDEB
Magmas
rs12542019 CPNE1
RBM12
rs10515181 CPNE1
RBM12
rs4411112 CPT1A
Some rows have 1 column, whereas some have 2. The ones that have 2 columns have one column (1st column) that start with rs.
I need to... (6 Replies)
Discussion started by: evelibertine
6 Replies
8. UNIX for Dummies Questions & Answers
I have a text file that looks like this:
1 rs523634 8.22486
1
1 rs585160 8.22488
1 rs497228 8.2249
1
1 rs600933 8.225
1 rs480106 8.22531
1 rs600199 8.22533
1 rs529015 8.22534
1 rs598894 8.22534
I want to delete the rows with empty... (2 Replies)
Discussion started by: evelibertine
2 Replies
9. Shell Programming and Scripting
Hi,
I'm working on a script that will take the contents of a file, that is in a row and column format, and compare it to a arrangment file. Such that if there is any or all blanks in my content file, the blank will be filled with a flag and will retain the row and column configuration.
Ex.
... (2 Replies)
Discussion started by: hizzle
2 Replies
10. Shell Programming and Scripting
Hi all,
I have a file that contains about 1000 rows and 800 columns. Nearly every row has 800 columns but some DONT. I want to extend the rows that dont have values with NA's. Here is an example:
my file
bob 2 4 5 6 8 9 4 5
tar 2 4 5 4 3 2 9 1
bro 3 5 3 4
yar 2 ... (7 Replies)
Discussion started by: gisele_l
7 Replies