10 More Discussions You Might Find Interesting
1. Shell Programming and Scripting
Helooo,
So I have a .fasta file (a text file with sequence data) which looks like this, with just over 3 million lines of data.
>TCONS_00000001 gene=XLOC_000001
AATTGTGGTGAAATGACTTCTGTTAACGGAGACATCGATGATTGTTGTTACTATTTGTTCTCAGGATTCA... (8 Replies)
Discussion started by: 4galaxy7
8 Replies
2. Shell Programming and Scripting
Hello,
I want to concatenate 2-columns by 2-columns separated by colon. How can I do so? For example, I have a text file containing 6 columns separated by tab. I want to concatenate column 1 and 2; column 3 and 4; column 5 and 6, respectively, and put a colon in between.
input file:
1 0 0 1... (10 Replies)
Discussion started by: huiyee1
10 Replies
3. Shell Programming and Scripting
Hi all,
I have certain task to do, which involves reading the first column of 1.txt file.
This is variable "event"
28434710
23456656
3456895
& finding this "event" in some other text file 2.txt, which has information in the following format
#Zgamma: 1 run: 160998 event: ... (7 Replies)
Discussion started by: nrjrasaxena
7 Replies
4. UNIX for Dummies Questions & Answers
I have a text file that has three columns. But at the end of the text file, there are trailing lines that have missing second and third columns:
4 0.04972604 KLHL28
4 0.0497332 CSTB
4 0.04979822 AIF1
4 0.04983331 DECR2
4 0.04990344 KATNB1
4
4
4
4
How can I remove the trailing... (3 Replies)
Discussion started by: evelibertine
3 Replies
5. UNIX for Dummies Questions & Answers
I have two text files: One is a single column of numbers and the other is a space delimited text file with multiple columns. I want to paste the single column of numbers into the second column of the latter text file. How do I go about doing that? Thanks! (1 Reply)
Discussion started by: evelibertine
1 Replies
6. Shell Programming and Scripting
Hi,
I need help searching through a large text file. I need to find a certain string within the text, and copy each line until another string appears.
The file looks like this:
>scf15164843
ATTAAAGGNNNGGAATTTCCCCAA
ATTACCGGCTTTAAANNNTTACCC
>scf15154847
CCGGGNNNTTTAAACCCGNGNGCC... (2 Replies)
Discussion started by: repiv
2 Replies
7. Shell Programming and Scripting
Hey guys
I have got a tab-separated file and I want to copy only selected records from two columns at a time satisfying specified condition, and create a new file.
My tab separated file is like this
ID score ID score ID Score ID score ID score
1_11 0.80 2_23 0.74 2.36 0.78 2_34 0.75
A_34... (9 Replies)
Discussion started by: jacks
9 Replies
8. UNIX for Dummies Questions & Answers
Hello Gurus,
I have a text file containing nearly 12,000 tab delimited characters with 4000 rows. If the file size is small, excel can convert the text into coloumns. However, the file that I have is very big. Can some body help me in solving this problem?
The input file example,
... (6 Replies)
Discussion started by: Unilearn
6 Replies
9. Shell Programming and Scripting
hi all, first time posting, hoping i can get some help on this.
I have about 80 text files containing text in this format:
# Rg Mass Density Rcm-x Rcm-y Area Rsph/sqrt(2)
# == ==== ======= ===== ===== ==== ... (9 Replies)
Discussion started by: Arlamos
9 Replies
10. UNIX for Dummies Questions & Answers
I have a text file that has over 300 lines that I need to paste identical data to. What is the easiest way to do this? For example if I have a file that has lines of text xxxxxxxx and I would like to change each line to look like this "display text(xxxxxxxx)". What would be the easiest way to do... (3 Replies)
Discussion started by: darthur
3 Replies