g03 problems on rocks 5.3 with sge queue.


 
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Old 02-02-2010
g03 problems on rocks 5.3 with sge queue.

Dear all,

I'm a new guy doing some quntum calculation with gaussian on my rocks clusters. Recently, my cluster upgraded to rocks 5.3, but something strange happened. Everything goes correct except a serious problem. when I summit my gaussian job with script to sge queue, the job does run, but with the following error message:
Code:
liuzhencc  /opt/gridengine/default/spool/compute-0-10/job_scripts/12: line 19: g03: command not found

However, the command "g03 gaussian.gjf" runs both on front node and all the computing nodes.

Actually, I reinstalled my cluster, but the problem still there.


Anyone could give some suggestions? Thanks!

PS: Before this upgration, everything goes correct.

Last edited by vbe; 02-03-2010 at 05:15 AM.. Reason: rm bad tags, added code tags
 
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chosts(1M)						  System Administration Commands						chosts(1M)

NAME
chosts - expand cluster names into host names SYNOPSIS
$CLUSTER_HOME/bin/chosts name [name...] DESCRIPTION
The chosts utility expands the arguments into a list of host names. OPERANDS
The following operands are supported: name The parameter name can be a hostname or a cluster name. If name is a hostname, it is expanded to be a hostname. If name is a cluster name, that is, an entry exists in the /etc/clusters database (or a NIS or NIS+ map), it is expanded into the list of hosts that make up that cluster, as specified in the database. The list is typically used by programs that wish to operate on a list of hosts. If an entry for clusters has been made in the /etc/nisswitch.conf file, then the order of lookups is controlled by that entry. If there is no such file or no such entry, then the nameservice look up order is implicitly nis files. ATTRIBUTES
See attributes(5) for descriptions of the following attributes: +-----------------------------+-----------------------------+ | ATTRIBUTE TYPE | ATTRIBUTE VALUE | +-----------------------------+-----------------------------+ |Availability |SUNWccon | +-----------------------------+-----------------------------+ |Interface Stability |Evolving | +-----------------------------+-----------------------------+ SEE ALSO
ccp(1M), cconsole(1M), cports(1M), crlogin(1M), cssh(1M), ctelnet(1M), clusters(4), attributes(5) Sun Cluster 3.2 8 Sep 2007 chosts(1M)