10 More Discussions You Might Find Interesting
1. UNIX for Beginners Questions & Answers
Hello,
I have the following script
while read id fraction
do
sambamba -h -f bam -t 10 --subsampling-seed=50 -s $frac ${id}.bam -o ${id}.out.bam
done < fraction.txt
where fraction.txt has two columns (id,fraction) and 50 rows
I am unable to run this as bash is not able to read the second... (2 Replies)
Discussion started by: nans
2 Replies
2. Shell Programming and Scripting
I'm new to utilities like socat and netcat and I'm not clear if they will do what I need.
I have a "compileDeployStartWebServer.sh" script and a "StartBrowser.sh" script that are started by emacs/elisp at the same time in two different processes.
I'm using Cygwin bash on Windows 10.
My... (3 Replies)
Discussion started by: siegfried
3 Replies
3. Shell Programming and Scripting
Hi,
id like to know how i do this :
if i have 2 different numbers:
so ok bash knows B is bigger then A but i like to know in how much ?
how can i calculate ?
how can i know what is their difference ?
like the way you know between 10 and 2 the difference is 8
Thanks. (2 Replies)
Discussion started by: batchenr
2 Replies
4. Shell Programming and Scripting
Hello everyone,
I need your assistance with bash.
I want to sum up some numbers, that's not the big problem i think, but the values i want to some depending on another number.
For example, I have a file with some rows of content.
Number 1, Number 2, other content.
I want to sum up number... (4 Replies)
Discussion started by: Bruder_Bruno
4 Replies
5. Shell Programming and Scripting
Hello All,
I was wondering if someone might know how to do this. I have a word list that is format like the example below. I need to take away the :number after that... is there some kind of command I could use to remove them?
123456:5562
password:1507
123456789:989
qwerty:877... (7 Replies)
Discussion started by: 3therk1ll
7 Replies
6. Shell Programming and Scripting
Hi,
I need to match up some numbers in one file to the closest numbers in other file and produce an output file.
File one (f1.txt) is laid out like this
PCode Lon Lat
AB10 1AA 57.148235 -2.096648
BB2 3JD 53.728563 -2.47852
LU4 9ET... (4 Replies)
Discussion started by: ian_gooch
4 Replies
7. Shell Programming and Scripting
Hi people :)
I'm learning shell scripting using bash and I want to generate 4 floating point number with 5 decimal places and write them to a file and a variable. I've done all this except the $RAMDOM enviroment variable does not generate a float number but a integrer.
I hope you could... (3 Replies)
Discussion started by: pharaoh
3 Replies
8. Shell Programming and Scripting
Hi,
I have lines in some files that look exactly as below, and the line numbers they occur in are always the same. (Lines 136-139)
W 0.00000000 0.00000000 2.00000000
W 0.50000000 0.50000000 2.50000000
W 0.00000000 0.00000000 3.00000000
W 0.50000000 0.50000000 3.50000000
I'd like to... (0 Replies)
Discussion started by: bluesmodular
0 Replies
9. UNIX for Dummies Questions & Answers
Hi,
I've been trying to replace the numbers in the first column of my text file with all ones, unless the number is equal to 8. I have this:
1 1 11 123 258
2 1 9 135 175
1 1 15 143 274
8 1 13 153 172
8 1 13 154 166
8 1 13 154 167
3 1 15 237 255
4 1 15 243 202
1 1 13 133 166... (4 Replies)
Discussion started by: goodbenito
4 Replies
10. Shell Programming and Scripting
Hey all,
I ran some simulations, of which the output is 100s of files. I've used grep to extract the vital information needed from the files. This has made my task somewhat easier. But I still need to perform some mathematical calculations (average and geometrical average) on the results of the... (9 Replies)
Discussion started by: slackjack
9 Replies