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openmpi - initialization failed

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Old 09-08-2012
openmpi - initialization failed
Hi everybody,

my problem is the following:
I'm trying to run an openmpi program on a cluster (atlasz.elte.hu, it's in hungarian, but you can try google translate),
but I always got this error:

Fatal error in MPI_Init: Other MPI error, error stack:
MPIR_Init_thread(394)...........: Initialization failed
MPID_Init(121)..................:
MPIDI_Populate_vc_node_ids(1219):
MPID_Get_max_node_id(798).......: PMI_KVS_Commit returned -1

I am doing it according to the manual, for example, here is my script:

#!/bin/bash

mpirun.openmpi /users/jkobori/boxfit/out/boxfit boxfitsettings.txt

which I am runnig with the sbatch -p hpc2009 -N 4 -B 2:4:1 s.sh line.
This is the way it should be done, but it doesn't work for me.
Can You help me out?

If any additional info is needed, please, tell me.

Regards,
Joe
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LEARN ABOUT HPUX

cmhaltcl

cmhaltcl(1m)															      cmhaltcl(1m)

NAME

       cmhaltcl - halt a high availability cluster

SYNOPSIS

       cmhaltcl [-f] [-v]

DESCRIPTION

       cmhaltcl  causes  all  nodes  in a configured cluster to stop their cluster daemons, optionally halting all packages or applications in the
       process.

       To stop a cluster, a user must either be superuser(UID=0), or have an access policy of FULL_ADMIN  allowed  in  the  cluster  configuration
       file. See access policy in cmquerycl(1).

       This  command  will  halt  all  the  daemons on all currently running systems.  If the user only wants to shutdown a subset of daemons, the
       cmhaltnode command should be used instead.

   Options
       cmhaltcl supports the following options:

	      -f   Force the cluster to shutdown even if packages or group members are currently running.  This will cause the packages and  group
		   members to be halted.  If a package halt fails, the cluster halt will also fail.

	      -v   Verbose output will be displayed.

RETURN VALUE

       cmhaltcl returns the following value:

	       0   Successful completion.
	       1   Command failed.

EXAMPLES

       Halt the cluster daemons:

	      cmhaltcl

AUTHOR

       cmhaltcl was developed by HP.

SEE ALSO

       cmquerycl(1m), cmhaltnode(1m), cmruncl(1m), cmrunnode(1m), cmviewcl(1m).

						      Requires Optional Serviceguard Software					      cmhaltcl(1m)