Bank group takes Linux migration a step at a time

8 More Discussions You Might Find Interesting

1. What is on Your Mind?

Slowly Removing Bold Font Style - Step-by-Step

FYI, I'm slowly removing a lot of the bold font-styles from titles of discussions, forum titles, etc I'm not removing bold for the entire site because we do need bold from time to time, especially in posts and sometimes in other places. However, the original forum style had way too much...

2. Red Hat

Volume group not activated at boot after SAN migration

I have an IBM blade running RHEL 5.4 server, connected to two Hitachi SANs using common fibre cards & Brocade switches. It has two volume groups made from old SAN LUNs. The old SAN needs to be retired so we allocated LUNs from the new SAN, discovered the LUNs as multipath disks (4 paths) and grew...

3. Shell Programming and Scripting

Wget takes a long time to complete

Hi, I wish to check the return value for wget $url. However, some urls are designed to take 45 minutes or more to return. All i need to check if the URL can be reached or not using wget. How can i get wget to return the value in a few seconds ?

4. AIX

Telnet or rsh takes too much time

telnet or rsh or ftp to an AIX machine takes too much time, like have to wait 3 minutes before the prompt appears. What can I look to troubleshoot this problem thanks

5. Red Hat

Login to server takes time

When I am trying to login to a server using Putty ssh from my windows xp machine it is taking too much time for login. My server name is http2 and when I enter this address into putty I immediately get login as: screen, but after I put my username root and enter the cursor moves downwards...

6. Shell Programming and Scripting

sort takes a long time

Dear experts I have a 200MG text file in this format: text \tab number I try to sort using options -fd and it takes very long! is that normal or I can speed it up in some ways? I dont want to split the file since this one is already splitted. I use this command: sort -fd file >...

7. Linux

it takes long time to login on server

Hi, I am trying to login using ssh on Red Hat Linux 5 server, The password appears immediately but after I enter the password it takes about 90 seconds to login completely. Please suggest what changes require? Regards, Manoj

8. Solaris

takes time to connect my application

getting delayed to connect to my database in solaris Does anyone help me to get out of this issue help will be more appreciated.

LEARN ABOUT DEBIAN

biomaj

biomaj(1)							   USER COMMANDS							 biomaj(1)

NAME

       biomaj - downloads and transform remote biological data banks

SYNOPSIS

       biomaj [-h]

DESCRIPTION

       BioMAJ (BIOlogie Mise A Jour) is a workflow engine dedicated
	to data synchronization and processing.The Software automates
	the update cycle and the supervision of the locally mirrored
	databank repository.  User must have roots rights to run biomaj.

OPTIONS

       -h     display the list of commands.

INSTALL

       At  installation, BioMAJ requires a database to run (MySQL), installer should first create a database (biomaj_log) and a database user (the
       one used at installation setup).
	The database configuration for biomaj can be set or modified in /etc/biomaj/db_properties/global.properties.

       In the install fails due to a SQL error, the install script must be manually run to create/upgrade the database:

       perl /usr/share/biomaj/sql/migration/update.pl

       The script will create/upgrade the database and update the configuration files.

ADMIN USER

       A default admin user (admin) is created by the scripts.	If using the biomaj-watcher, the default password (admin) MUST be changed  immedi-
       atly via the watcher interface.

       If only biomaj core is used, password is useless.
	.PP

UPGRADE

	In the case of a package upgrade, if properly configured, the migration scripts will be ran automatically at install.
	It is possible to run manually the script:
	.B See perl /usr/share/biomaj/sql/migration/update.pl -h
	for usage.

DATA BANKS

       By default, biomaj is configured (data.dir in global.properties) to write banks to /var/lib/biomaj.

EXAMPLES

       Update a bank:
	      biomaj --update genbank

       Show console
	      biomaj --update genbank --console

       Show status:
	      biomaj --status

EXIT STATUS

       biomaj returns a zero exist status if it succeeds, it does not represent the bank update status.

AUTHOR

       Olivier Sallou (olivier.sallou (at) irisa.fr) Romaric Sabas (romaric.sabas (at) irisa.fr)

version 1.2.0							September 14, 2011							 biomaj(1)

UNIX and Linux RSS News