overlap(1) The Computational Morphometry Toolkit overlap(1)
NAME
overlap - Overlap computation
SYNOPSIS
overlap [options] image0 image1 [image2 ...]
DESCRIPTION
Compute overlap measures between two or more images
OPTIONS
Global Toolkit Options (these are shared by all CMTK tools)
--help
Write list of basic command line options to standard output.
--help-all
Write complete list of basic and advanced command line options to standard output.
--wiki
Write list of command line options to standard output in MediaWiki markup.
--man
Write man page source in 'nroff' markup to standard output.
--version
Write toolkit version to standard output.
--echo
Write the current command line to standard output.
--verbose-level <integer>
Set verbosity level.
--verbose, -v
Increment verbosity level by 1 (deprecated; supported for backward compatibility).
--threads <integer>
Set maximum number of parallel threads (for POSIX threads and OpenMP).
Main Options
--pad-in <double>, -p <double>
Define padding value for input images [Default: disabled]
--mask <string>, -m <string>
Mask file for optional region-based analysis [Default: NONE]
--num-labels <integer>, -N <integer>
Number of label values [default: autodetect] [Default: 0]
--first-label <integer>, -f <integer>
Index of first label value [default: 0]; labels below this one are ignored [Default: 0]
--by-label
Analysis by label, i.e., separately for each label in given (detected) range
AUTHORS
Torsten Rohlfing, with contributions from Michael P. Hasak, Greg Jefferis, Calvin R. Maurer, and Daniel B. Russakoff
LICENSE
http://www.fsf.org/licensing/licenses/gpl.html
BUGS
Report bugs at http://nitrc.org/projects/cmtk/
ACKNOWLEDGMENTS
From April 2009 through September 2011, CMTK Development and Maintenance was supported by the National Institute of Biomedical Imaging and
Bioengineering under Grant No.R01 EB008381 (PI: Torsten Rohlfing).
CMTK 2.2.2 Jul 20 2012 overlap(1)