|
|
DBTree 0.8.6 (Default branch)
06-23-2008
DBTree is a cross-platform (both database andoperating system) general purpose database querytool. Some of the primary features of DBTree are atabbed interface which allows you multi-databaseconnectivity and multiple Workbooks perconnection. A Workbook is the main query interfaceand is optimized for productivity and ease of use.DBTree also features automatic session saving andloading upon startup.License: FreewareChanges:|
|
GO::Model::Xref(3pm) User Contributed Perl Documentation GO::Model::Xref(3pm) NAME
GO::Model::Xref - cross reference to an external database SYNOPSIS
my $xrefs = $term->dbxref_list(); foreach my $xref (@$xrefs) P printf "Term %s has an xref %s:%s ", $term->name, $xref->xref_key, $xref->dbname; } DESCRIPTION
represents a cross reference to an external database. an Xref is made up of a key (ie the accession number, or whatever the value of the unique field being keyed off of is) and a database name. this should theorerically be enough to uniquely identify any databased entity. NOTES
Like all the GO::Model::* classes, this uses accessor methods to get or set the attributes. by using the accessor method without any arguments gets the value of the attribute. if you pass in an argument, then the attribuet will be set according to that argument. for instance # this sets the value of the attribute $my_object->attribute_name("my value"); # this gets the value of the attribute $my_value = $my_object->attribute_name(); xref_key Alias - acc Alias - accession Usage - Returns - Args - accessor: gets/sets the key/id of the cross reference xref_keytype Usage - Returns - Args - accessor: gets/sets the key/id type of the cross reference as_str Usage - Returns - Args - xref_dbname Alias - dbname Usage - Returns - Args - accessor: gets/sets the database name of the cross reference must be a valid database name xref_desc Alias - name Usage - Returns - Args - accessor: gets/sets the description of the accession no useful for interpro to_xml Usage - print $xref->to_xml() Returns - string Args - indent [integer] XML representation; you probably shouldnt call this directly, this will be called by entities that own xrefs perl v5.14.2 2013-02-07 GO::Model::Xref(3pm)