10 More Discussions You Might Find Interesting
1. Shell Programming and Scripting
I have this fastq file:
@M04961:22:000000000-B5VGJ:1:1101:9280:7106 1:N:0:86
GGGGGGGGGGGGCATGAAAACATACAAACCGTCTTTCCAGAAATTGTTCCAAGTATCGGCAACAGCTTTATCAATACCATGAAAAATATCAACCACACCA
+test-1
GGGGGGGGGGGGGGGGGCCGGGGGFF,EDFFGEDFG,@DGGCGGEGGG7DCGGGF68CGFFFGGGG@CGDGFFDFEFEFF:30CGAFFDFEFF8CAF;;8... (10 Replies)
Discussion started by: Xterra
10 Replies
2. Shell Programming and Scripting
Hi
I have a wired string pattern ( mongo output) which I need to convert to only values.
"_id" : ObjectId("59280d9b95385c78b73252e4"), "categorySetId" : NumberLong(1100000041), "categorySetName" : "PROD GROUP", "serviceableProductFlag" : "N", "categoryId" : NumberLong(1053), "pid" :... (5 Replies)
Discussion started by: Abhayman
5 Replies
3. Shell Programming and Scripting
Hi All,
Assuming i have got a file test.dat which has contains as follows:
Unix = abc def fgt jug
111 2222 3333
Linux = gggg pppp qqq
C# = ccc ffff llll
I would like to traverse through the file, get the 1st occurance of "=" and then need to get the sting... (22 Replies)
Discussion started by: rtagarra
22 Replies
4. Shell Programming and Scripting
sed -e "s// /g" old.txt > new.txt
While I do know some control characters need to be escaped, can normal characters also be escaped and still work the same way? Basically I do not know all control characters that have a special meaning, for example, ?, ., % have a meaning and have to be escaped... (11 Replies)
Discussion started by: ijustneeda
11 Replies
5. Shell Programming and Scripting
I have a list of strings, for example:
set strLst = "file1 file2 file3 file4"
I want to log an error if some of the fields happen to begin with -, or have characters like ; : ' , ? ] { =
Which means for example setting
set ierr = 1 (2 Replies)
Discussion started by: kristinu
2 Replies
6. UNIX for Dummies Questions & Answers
After spending sometime playing around with my script I just cannot get it to do what I want. So I decided to ask. My file looks something like this:
I am using the following code to extract sequences that contain dashes
awk '/^>/{id=$0;next}{if (match($1,"-")) print id "\n" $0}' infile
... (17 Replies)
Discussion started by: Xterra
17 Replies
7. Shell Programming and Scripting
Hello all
I am getting data like
col1 | col2 | col3
asdafa | asdfasfa | asf*&^sgê
345./ |sdfasd23425^%^&^ | sdfsa23
êsfsfd | sf(* | sdfsasf
My requirement is like
I have to to read the file and remove all special characters and hex characters ranging form 00-1f from 1st column, remove %"'... (1 Reply)
Discussion started by: vasuarjula
1 Replies
8. Shell Programming and Scripting
I have the following line:
4/23/2010 0:00:38.000: Copying $$3MSYDDC02$I would like to use sed (or similiar) to remove everthing between and including $ that appears in the line so it ends up like this.
4/23/2010 0:00:38.000: Copying 3MSYDDC02I have been trying these but i'm really just... (5 Replies)
Discussion started by: jelloir
5 Replies
9. Shell Programming and Scripting
Hi all,
I want to delete all lowercase characters from my file, but only strings of length 7 and more.
For example, how can I go from:
JHGEFigeIGDUIirfyfiyhgfoiyfKJHGuioyrDHG
To:
JHGEFigeIGDUIKJHGuioyrDHG
There should be a trick to add to sed 's///g', but I can't figure it out.... (2 Replies)
Discussion started by: elbuzzo
2 Replies
10. UNIX for Dummies Questions & Answers
please send the logic or program to find the matching characters between two strings
for ex string1 :abc
string2 :adc
no .of matching characters is 2(a,c) (9 Replies)
Discussion started by: akmtcs
9 Replies