10 More Discussions You Might Find Interesting
1. UNIX for Beginners Questions & Answers
For some reason I am having difficulty performing what should be a fairly easy task. I would like to print lines of a file that have a unique value in the first field. For example, I have a large data-set with the following excerpt:
PS003,001 MZMWR/ L-DWD// *
PS003,001... (4 Replies)
Discussion started by: jvoot
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2. Shell Programming and Scripting
In the awk below I am trying to print the entire line, along with the header row, if $2 is SNV or MNV or INDEL. If that condition is met or is true, and $3 is less than or equal to 0.05, then in $7 the sub pattern :GMAF= is found and the value after the = sign is checked. If that value is less than... (0 Replies)
Discussion started by: cmccabe
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3. Shell Programming and Scripting
Hello All,
This is to request some assistance on the issue that I encountered until recently.
Problem is:
I have a pipe delimited file in which some lines/records are broken. Now, I have to join/concatenate broken lines in the file to form actual record to make sure that the count of records... (8 Replies)
Discussion started by: svks1985
8 Replies
4. Shell Programming and Scripting
Hi Folks,
I have a file with fields as follows which has last field in multiple lines. I would like to combine a line which has three fields with single field line for as shown in expected output. Please help.
INPUT
hname01 windows appnamec1eda_p1, ... (5 Replies)
Discussion started by: shunya
5 Replies
5. Shell Programming and Scripting
I am trying to add a condition to the below perl that will capture the GTtag and place a specific string in the last field of each line. The problem is that the GT value used is not right after the tag rather it is a few fields away. The values should always be 0/1 or 1/2 and are in bold in the... (12 Replies)
Discussion started by: cmccabe
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6. UNIX for Dummies Questions & Answers
hi
i have a file with the following lines
2303:13593:137135 16 abc1 26213806.......
1234:45675:123456 16 bbc1 9813806.......
2303:13593:137135 17 bna1 26566444....
1234:45675:123456 18 nnb1 98123456.......
i want to join the lines having common 1st field i,e.,
... (1 Reply)
Discussion started by: anurupa777
1 Replies
7. Shell Programming and Scripting
Hi,
I have an issue to combine multiple lines of a file. I have records as below.
Fields are delimited by TAB. Each lines are ending with a new line char (\n)
Input
--------
ABC 123456 abcde 987
890456 7890 xyz
ght gtuv
ABC 5tyin 1234 789
ghty kuio
ABC ghty jind 1234
678 ght
... (8 Replies)
Discussion started by: ratheesh2011
8 Replies
8. Shell Programming and Scripting
I have a csv file that I would like to remove duplicate lines based on field 1 and sort. I don't care about any of the other fields but I still wanna keep there data intact. I was thinking I could do something like this but I have no idea how to print the full line with this. Please show any method... (8 Replies)
Discussion started by: cokedude
8 Replies
9. Shell Programming and Scripting
Dear All,
I would like to add values of a field, if the lines match in a certain field. Then I would like to divide the sum though the number of lines that have a matched field. This is the Input:
Input:
Test1 5
Test1 10
Test2 2
Test2 5
Test2 13
Test3 4
Output:
Test1 7.5
Test1 7.5... (6 Replies)
Discussion started by: DerSeb
6 Replies
10. Shell Programming and Scripting
hello, hope you can help me:
ive got a file called archivos
The content or structure of this file is
./chu0/filechu
./chu1/filechu
I extract each line from this file manually and redirect to a file, and it Works fine, so the command line is:
awk ‘/chu0/ {print $0}' < archivos >... (8 Replies)
Discussion started by: alexcol
8 Replies
COMM(1) BSD General Commands Manual COMM(1)
NAME
comm -- select or reject lines common to two files
SYNOPSIS
comm [-123i] file1 file2
DESCRIPTION
The comm utility reads file1 and file2, which should be sorted lexically, and produces three text columns as output: lines only in file1;
lines only in file2; and lines in both files.
The filename ``-'' means the standard input.
The following options are available:
-1 Suppress printing of column 1.
-2 Suppress printing of column 2.
-3 Suppress printing of column 3.
-i Case insensitive comparison of lines.
Each column will have a number of tab characters prepended to it equal to the number of lower numbered columns that are being printed. For
example, if column number two is being suppressed, lines printed in column number one will not have any tabs preceding them, and lines
printed in column number three will have one.
The comm utility assumes that the files are lexically sorted; all characters participate in line comparisons.
DIAGNOSTICS
The comm utility exits 0 on success, and >0 if an error occurs.
SEE ALSO
cmp(1), diff(1), sort(1), uniq(1)
STANDARDS
The comm utility conforms to IEEE Std 1003.2-1992 (``POSIX.2'').
HISTORY
A comm command appeared in Version 4 AT&T UNIX.
BSD
June 6, 1993 BSD