10 More Discussions You Might Find Interesting
1. UNIX for Beginners Questions & Answers
Hi,
So awk is driving me crazy on this one. I have searched everywhere and read man, docs and every related post Google can find and still no luck. The actual files I need to run this on are sensitive in nature, but it is the same thing as if I needed to calculate weighted grades for multiple... (15 Replies)
Discussion started by: cotilloe
15 Replies
2. Shell Programming and Scripting
In the awk below I am trying to set/update the value of $14 in file2 in
bold, using the matching NM_ in $12 or $9 in file2
with the NM_ in $2 of file1.
The lengths of $9 and $12 can be variable but what is consistent is the start pattern
will always be NM_ and the end pattern is always ;... (2 Replies)
Discussion started by: cmccabe
2 Replies
3. Shell Programming and Scripting
I am trying to output a tab-delimited result that uses the data from a tab-delimited file to combine and subtract specific lines.
If $4 matches in each line then the first matching sequential $6 value is added to $2, unless the value is 1, then the original $2 is used (like in the case of line... (3 Replies)
Discussion started by: cmccabe
3 Replies
4. Shell Programming and Scripting
In the below I am trying to use awk to match all the $13 values in input, which is tab-delimited,
that are in $1 of gene which is just a single column of text.
However only the line with the greatest $9 value in input needs to be printed.
So in the example below all the MECP2 and LTBP1... (0 Replies)
Discussion started by: cmccabe
0 Replies
5. Shell Programming and Scripting
I am trying to parse the input in awk to include the |gc= in $4 but am not able to. The below is close:
awk so far:
awk '{sub(/\|]+]++/, ""); print }' input.txt Input
chr1 955543 955763 AGRN-6|pr=2|gc=75 0 +
chr1 957571 957852 AGRN-7|pr=3|gc=61.2 0 +
chr1 970621 ... (7 Replies)
Discussion started by: cmccabe
7 Replies
6. UNIX for Dummies Questions & Answers
Hi !
Here is an example of a tab-delimited file with variable width values in field 2 (space separated values).
As the real file contains lot of lines, I can adjust manually the width to the largest value in field 2.
Does it exist an argument to do it automatically?
input.tab:... (4 Replies)
Discussion started by: lucasvs
4 Replies
7. Shell Programming and Scripting
First, thanks for the help in previous posts... couldn't have gotten where I am now without it!
So here is what I have, I use AWK to match $1 and $2 as 1 string in file1 to $1 and $2 as 1 string in file2. Now I'm wondering if I can extend this AWK command to incorporate the following:
If $1... (4 Replies)
Discussion started by: right_coaster
4 Replies
8. Shell Programming and Scripting
I have two text files like this:
file1.txt:
133 10
133 22
133 13
133 56
133 78
133 98
file2.txt:
158 38
158 67
158 94
158 17
158 23
I'm basically trying to have awk check the second largest value of the second column of each text file, and cat it to its own text file. There... (13 Replies)
Discussion started by: theawknewbie
13 Replies
9. Shell Programming and Scripting
Hi, all
I need to get fields in a line that are separated by commas, some of the fields are enclosed with double quotes, and they are supposed to be treated as a single field even if there are commas inside the quotes.
sample input:
for this line, 5 fields are supposed to be extracted, they... (8 Replies)
Discussion started by: kevintse
8 Replies
10. Shell Programming and Scripting
Hey,
This is a long-shot however, I am stuck with the following problem:
I have the output from ls -la, and I want to sort some of that data out by using AWK to filter it.
ls -la | awk -f scriptname.awk
Input:
For example:
drwxr-xr-x 3 user users 4096 2010-03-14 20:15 bin/... (5 Replies)
Discussion started by: abciscool
5 Replies