match value from file1 in file2


 
Thread Tools Search this Thread
Top Forums Shell Programming and Scripting match value from file1 in file2
# 1  
Old 02-11-2008
match value from file1 in file2

Hi, i've two files (file1, file2) i want to take value (in column1) and search in file2 if the they match print the value from file2.

this is what i have so far.

awk 'FILENAME=="file1"{ arr[$1]=$1 }
FILENAME=="file2"
{print $0}
' file1 file2
# 2  
Old 02-11-2008
try:
Code:
awk 'FILENAME=="file1"{ arr[$1]=$1 }
      FILENAME=="file2" {if(arr($1] ) {print $0} }
' file1 file2

# 3  
Old 02-21-2008
Hi Jim, thanks this is working.

what should i do if i want to compare file2 (col1) not in file1 (Anywhere in file). then print the line from FILE2.


Quote:
Originally Posted by jim mcnamara
try:
Code:
awk 'FILENAME=="file1"{ arr[$1]=$1 }
      FILENAME=="file2" {if(arr($1] ) {print $0} }
' file1 file2

Login or Register to Ask a Question

Previous Thread | Next Thread

10 More Discussions You Might Find Interesting

1. UNIX for Beginners Questions & Answers

Keep only the closet match of timestamped row (include headers) from file1 to precede file2 row/s

This is a question that is related to one I had last August when I was trying to sort/merge two files by millsecond time column (in this case column 6). The script (below) that helped me last august by RudiC solved the puzzle of sorting/merging two files by time, except it gets lost when the... (0 Replies)
Discussion started by: aachave1
0 Replies

2. Shell Programming and Scripting

awk to search field2 in file2 using range of fields file1 and using match to another field in file1

I am trying to use awk to find all the $2 values in file2 which is ~30MB and tab-delimited, that are between $2 and $3 in file1 which is ~2GB and tab-delimited. I have just found out that I need to use $1 and $2 and $3 from file1 and $1 and $2of file2 must match $1 of file1 and be in the range... (6 Replies)
Discussion started by: cmccabe
6 Replies

3. UNIX for Beginners Questions & Answers

Keep only the closet match of timestamped row (include headers) from file1 to precede file2 row/s

My original files are like this below and I distinguish them from the AP_ID (file1 has 572 and file2 has 544). Also, the header on file1 has “G_” pre-pended. NOTE: these are only snippets of very large files and much of the data is not present here. Original File 1: ... (36 Replies)
Discussion started by: aachave1
36 Replies

4. Shell Programming and Scripting

Print sequences from file2 based on match to, AND in same order as, file1

I have a list of IDs in file1 and a list of sequences in file2. I can print sequences from file2, but I'm asking for help in printing the sequences in the same order as the IDs appear in file1. file1: EN_comp12952_c0_seq3:367-1668 ES_comp17168_c1_seq6:1-864 EN_comp13395_c3_seq14:231-1088... (5 Replies)
Discussion started by: pathunkathunk
5 Replies

5. Shell Programming and Scripting

Match single line in file1 to groups of lines in file2

I have two files. File 1 is a two-column index file, e.g. comp11084_c0_seq6:130-468(-) comp12746_c0_seq3:140-478(+) comp11084_c0_seq3:201-539(-) comp12746_c0_seq2:191-529(+) File 2 is a sequence file with headers named with the same terms that populate file 1. ... (1 Reply)
Discussion started by: pathunkathunk
1 Replies

6. Shell Programming and Scripting

Match part of string in file2 based on column in file1

I have a file containing texts and indexes. I need the text between (and including ) INDEX and number "1" alone in line. I have managed this: awk '/INDEX/,/1$/{if (!/1$/)print}' file1.txt It works for all indexes. And then I have second file with years and indexes per year, one per line... (3 Replies)
Discussion started by: phoebus
3 Replies

7. Shell Programming and Scripting

Based on column in file1, find match in file2 and print matching lines

file1: file2: I need to find matches for any lines in file1 that appear in file2. Desired output is '>' plus the file1 term, followed by the line after the match in file2 (so the title is a little misleading): This is honestly beyond what I can do without spending the whole night on it, so I'm... (2 Replies)
Discussion started by: pathunkathunk
2 Replies

8. UNIX for Dummies Questions & Answers

if matching strings in file1 and file2, add column from file1 to file2

I have very limited coding skills but I'm wondering if someone could help me with this. There are many threads about matching strings in two files, but I have no idea how to add a column from one file to another based on a matching string. I'm looking to match column1 in file1 to the number... (3 Replies)
Discussion started by: pathunkathunk
3 Replies

9. Shell Programming and Scripting

Match one column of file1 with that of file2

Hi, I have file1 like this aaa ggg ddd vvv eeeand file2 aaa 2 aaa 443 xxx 76 aaa 34 ggg 33 wee 99 ggg 33 ddd 1 ddd 10 ddd 98 sds 23 (4 Replies)
Discussion started by: polsum
4 Replies

10. Shell Programming and Scripting

AWK: Pattern match between 2 files, then compare a field in file1 as > or < field in file2

First, thanks for the help in previous posts... couldn't have gotten where I am now without it! So here is what I have, I use AWK to match $1 and $2 as 1 string in file1 to $1 and $2 as 1 string in file2. Now I'm wondering if I can extend this AWK command to incorporate the following: If $1... (4 Replies)
Discussion started by: right_coaster
4 Replies
Login or Register to Ask a Question