10 More Discussions You Might Find Interesting
1. UNIX for Beginners Questions & Answers
I have a variation table (variation.txt) which is a very big file. The first column in the chromosome number and the second column is the position of the variation. I have a second file annotation.txt which has a list of 37,000 genes (1st column), their chromosome number(2nd column), their start... (1 Reply)
Discussion started by: Sanchari
1 Replies
2. UNIX for Beginners Questions & Answers
Is it possible to toggle back and forth between an xterm invoked from one tty, and a shell invoked from a different tty?
I am running Centos 7 with KDE and booting in non-graphic mode. After logging in on the default window (/dev/tty1) , I can then use ALT-F2 to access a new window (/dev/tty2),... (1 Reply)
Discussion started by: rhgscty
1 Replies
3. UNIX for Dummies Questions & Answers
Hi,
I would like to know how can I get the ID of a feature if its genomic coordinates overlap the coordinates of another file. Example:
Get the 4th column (ID) of this file1:
chr1 10 100 gene1
chr2 3000 5000 gene2
chr3 200 1500 gene3
if it overlaps with a feature in this file2:
chr2... (1 Reply)
Discussion started by: fadista
1 Replies
4. UNIX for Dummies Questions & Answers
Hi,
I would like to have the length of a segment based on coordinates of its parts.
Example input file:
chr11 genes_good3.gtf aggregate_gene 1 100 gene1
chr11 genes_good3.gtf exonic_part 1 60
chr11 genes_good3.gtf exonic_part 70 100
chr11 genes_good3.gtf aggregate_gene 200 1000 gene2... (2 Replies)
Discussion started by: fadista
2 Replies
5. Shell Programming and Scripting
Hello all, this might be better suited for a bioinformatics forum, but I thought I'd try my luck here as well.
I have several tabular text files of DNA sequence reads that appear as such:
File_1.txt
>H01BA45XW GATTACAGATTCGACATCCAACTGAGGCATT
>H02BG78WR CCTTACAGACTGGGCATGAATATTGCATACC... (3 Replies)
Discussion started by: vectorborne5
3 Replies
6. Shell Programming and Scripting
Hi guys. Can anyone tell me how to determine points between two coardinates. For example: Which type of command line gives me
50 points between (8, -5, 7) and (2, 6, 9) points
Thanks (5 Replies)
Discussion started by: rpf
5 Replies
7. Shell Programming and Scripting
Hi,
I have this problem on how to place the cursor in a text editor (for example: pico).
I made this script that would attach comments to a script file then open the script file,
I would like to know how to place the cursor in a specific place,
for example at the end of the comments,
... (1 Reply)
Discussion started by: lechelle
1 Replies
8. Red Hat
Hi everyone!
I have a strange situation. I'm running an NX remote Gnome desktop session. On the remote machine, there is a whole load of unsaved data in a window. A problem that I've been having with this NX session is that I can't load Gnome Applets, including the Window Switcher. So.. when I... (0 Replies)
Discussion started by: alexandicity
0 Replies
9. UNIX for Advanced & Expert Users
How can I define the size of the terminal window?
If I open multiple windows, it should be opened by these defined sizes.
I need your help in this.
Thanking you in advance. (0 Replies)
Discussion started by: sharif
0 Replies
10. Windows & DOS: Issues & Discussions
Hello,
We someone help me resolve this problem. I have window 2000 professional, windows 98 and Unixware 7.0.1 on the network. I was able to establish connection with all. However, l was unable to ping window 98 from window 2000 professional. I was able to ping the window 2000 from the window... (10 Replies)
Discussion started by: kayode
10 Replies