10 More Discussions You Might Find Interesting
1. UNIX for Beginners Questions & Answers
I need help to extract transcript information from gff3 file.
Here is the input
Chr01 JGI gene 82773 86941 . - . ID=Potri.001G000900;Name=Potri.001G000900
Chr01 JGI mRNA 82793 86530 . - . ID=PAC:27047814;Name=Potri.001G000900.1;pacid=27047814;longest=1;Parent=Potri.001G000900... (6 Replies)
Discussion started by: Maduranga
6 Replies
2. Shell Programming and Scripting
Hi all, I have a query that runs that outputs data in the following format -
01/09/12 11:43:40,ADMIN,4,77,Application Group Load: Name(TESTED) LoadId(5137-1-0-1XX-15343-15343) File(/dir/dir/File.T03.CI2.RYR.2012009.11433350806.ARD) InputSize(5344) OutputSize(1359) Rows(2) Time(1.9960)... (8 Replies)
Discussion started by: jeffs42885
8 Replies
3. Shell Programming and Scripting
In a particular directory, there can be 1000 files like below.
filename is job901.ksh
#!/bin/ksh
cront -x << EOJ
submit file=$PRODPATH/scripts/genReport.sh maxdelay=30
&node=xnode01
tname=job901
&pfile1=/prod/mldata/data/test1.dat
... (17 Replies)
Discussion started by: vedanta
17 Replies
4. Shell Programming and Scripting
Gents,
If is possible please help.
I have a big file (example attached) which contends exactly same value in column, but from column 2 to 6 these values are diff. I will like to compile for all records all columns like the example attached in .csv format (output.rar ).. The last column in the... (11 Replies)
Discussion started by: jiam912
11 Replies
5. Shell Programming and Scripting
Hello!
I need help :) I have a file like this:
AA BC FG
RF TT GH
DD FF HH
(a few number of rows and three columns) and I want to put the letters of each column in a variable step by step in order to give them as input in another script. So I would like to obtain:
for the 1° loop:... (11 Replies)
Discussion started by: edekP
11 Replies
6. Shell Programming and Scripting
hi, i have a file A like this:
******************* No 2823 ********************
contig15205-
G383C4U02H4G80+ is in contig15205-
G383C4U02HGLXM- is in contig15205-
G383C4U01C3HIZ+ is in contig15205-
... (3 Replies)
Discussion started by: the_simpsons
3 Replies
7. Shell Programming and Scripting
Hi, i have a file like this:
<Iteration>
<Iteration_iter-num>3</Iteration_iter-num>
<Iteration_query-ID>lcl|3_0</Iteration_query-ID>
<Iteration_query-def>G383C4U01EQA0A length=197</Iteration_query-def>
<Iteration_query-len>197</Iteration_query-len>
... (9 Replies)
Discussion started by: the_simpsons
9 Replies
8. Shell Programming and Scripting
Hello people :)
That's here my first message to your forum, so I guess it would be fine ^^
I have a request about a code I want to use.
Actually, my system use a large variable, including much informations but those informations can change by more and I want to extract one of thoses... (26 Replies)
Discussion started by: WolwX
26 Replies
9. UNIX for Dummies Questions & Answers
Hi
I need to put together a script that will search certain tables in a db and send that data to a csv file.
Basically I am importing data to a db and I want to write a script to check that all information was imported correctly.
Thank you (1 Reply)
Discussion started by: ladyAnne
1 Replies
10. Shell Programming and Scripting
hi all, i am quite new with Perl (just 1 week of experience) and i am suppose to understand the usage of library, which i can't, anyway...
i came across this library...i think from the linux redhat redhat.linux.lib.pl, there are a couple of functions there that can be used to retrieve information... (3 Replies)
Discussion started by: mercz
3 Replies