10 More Discussions You Might Find Interesting
1. Shell Programming and Scripting
Hey guys,
I have wrote the following script to apply a module named "trinity" on my files. (it takes two input files and spit a trinity.fasta as output)
#!/bin/bash -l
#SBATCH -p node
#SBATCH -A <projectID>
#SBATCH -n 16
#SBATCH -t 7-00:00:00
#SBATCH --mem=128GB
#SBATCH --mail-type=ALL... (1 Reply)
Discussion started by: @man
1 Replies
2. Shell Programming and Scripting
I'm using cygwin32 on Windows.
DN is an environment variable pointed at my download directory.
This command works to move the single most recent file in my download directory to my current directory:
mv "`perl -e '$p = $ARGV; opendir $h, $p or die "cannot opendir $p: $!"; @f = sort { -M $a... (2 Replies)
Discussion started by: siegfried
2 Replies
3. UNIX for Dummies Questions & Answers
I have a directory e2e_ms_xfer/cent01
this contains the multiple files some of which will be named below with unique date time stamps
e2e_ms_edd_nom_CCYYMMDD_HHMM.csv
What I want to do is in a loop
1) Get the oldest file
2) Rename
3) Move it up one level from e2e_ms_xfer/cent01 to... (1 Reply)
Discussion started by: andymay
1 Replies
4. Shell Programming and Scripting
Hello there! I'm having a lot of trouble writing a script.
The script is supposed to:
1) Find all files with the name "Object.mtl" within each folder in the directory: /Users/username/Desktop/convert/Objects
2) Search and replace the string ".bmp" with ".tif" (without the quotations)
3)... (1 Reply)
Discussion started by: Blue Solo
1 Replies
5. Shell Programming and Scripting
hi people;
i want to make a file/folder operation as follows.
- i have 41 folders in Windows and each of them have same-named files (~200 files each) inside.
- i want to stack these files together in a folder but Windows is asking to "overwrite" (as usual) since the file names are the same.... (2 Replies)
Discussion started by: gc_sw
2 Replies
6. Shell Programming and Scripting
Hi all. Im trying to use a sequence in a while loop like this below. I need it for navigating a year, month, day folder structure where a user can input the start date and have it go to the desired end date. The script will grab a certain file on each day then move onto the next. Ive got all that... (3 Replies)
Discussion started by: Grizzly
3 Replies
7. Shell Programming and Scripting
Hi,
I need to do something easy but I can't seem to figure out how to do this.
Let's say I have 6 files in the directory below:
/ebsbeta_f/flash/EBSUATQB/onlinelog
o1_mf_6_55klt7nr_.log
o1_mf_3_55klskj4_.log
o1_mf_4_55klsrl1_.log
o1_mf_5_55klt09p_.log
o1_mf_2_55klv1ts_.log... (10 Replies)
Discussion started by: exm
10 Replies
8. Shell Programming and Scripting
Hello,
I'm new in the forum and in UNIX scripting, what I need is to write a simple batch script that renames or move the files back & forth from one directory to another, and then schedule the script to run on the server when the scheduled down time is, which is on Thursdays at 8pm and during... (5 Replies)
Discussion started by: dannyghost
5 Replies
9. UNIX for Dummies Questions & Answers
I am connecting to a remote server (Unix) and doing a ftp dowmload of files. The script (VB script) works fine except for not being able to move the downloaded files on the remote server to another folder.
I need to move all files with an .asc extesnion from folder "tovecellio_edi" to folder... (1 Reply)
Discussion started by: snufse
1 Replies
10. Shell Programming and Scripting
1. If I have a file-yyyymmdd.dat in a directory DATA1, then how do I move this file to directory DATA2 and the file name change to file-yyyymmdd.dat.currenttime
I can manual do this
$mv fileA-yyyymmdd.dat ./DATA2/fileA-yyyymmdd.dat.`date +%Y%m%d%H%M%S`
but how do I move all of the files in... (1 Reply)
Discussion started by: sabercats
1 Replies
