10 More Discussions You Might Find Interesting
1. UNIX for Beginners Questions & Answers
I currently have a loop that reads all .bam files in a directory (wont always be 4 like in this example,
into $id. What I am trying to do, unsucessfully, is create specific new lines in an exsisting command using
each $id. Each new line would be:
--bam ${id} \
Tried
p=$dir... (8 Replies)
Discussion started by: cmccabe
8 Replies
2. Shell Programming and Scripting
I need to be able to use a sed command as a variable in a bash script. I have the sed command that almost works the way I want it. the command is
sed -n '/inet/,/}/p' config.boot
This gets me this result:
inet 192.168.1.245
}
I need to get the IP address into a variable so I... (9 Replies)
Discussion started by: edlentz
9 Replies
3. UNIX for Beginners Questions & Answers
In the else of the main if condition .
else
set lnk = $(readlink -f <path> | cut -d '/' -f7)
echo "$lnk"
if ]
When I run the above on command line , the execution seems to be fine and I get the desired output. But when I try to assign it to a variable within a loop... (12 Replies)
Discussion started by: sankasu
12 Replies
4. Shell Programming and Scripting
Hi All;
I have 2 variable let's say $A and $B. These are actually some remotely executed command outputs. I captured these values in my local variables. Here is my problem. When I try to do some arithmetic operation with these variables, I receive an error message. Neither expr nor typeset -i... (3 Replies)
Discussion started by: Meacham12
3 Replies
5. Shell Programming and Scripting
Hi,
Will following set up work in bash script? I've got errors if assigning following binary command to a variable. But on the other hand, COMMAND="ls" works. Any explanation please? How can I assign binary command to a variable COMMAND then I can just call ${COMMAND}?
COMMAND="rsync"... (3 Replies)
Discussion started by: hce
3 Replies
6. Shell Programming and Scripting
Hi,
I am trying to write a PBS shell script that launches a bash process. The issue is that the bash process needs a variable in it and the shell script is interpreting the variable. How do I pass this as a literal string? Here is my code snippit:
TMP=".fasta"
FILEOUT=$FILE$TMP
cd... (2 Replies)
Discussion started by: bioBob
2 Replies
7. Shell Programming and Scripting
Hi,
I am trying to do the following thing
var='date'
$var
Above command substitutes date for and in turn runs the date command and i am getting the todays date value.
I am trying to do the same thing as following, but facing some problems,
unique_host_pro="sed -e ' /#/d'... (3 Replies)
Discussion started by: gvinayagam
3 Replies
8. Shell Programming and Scripting
Hi,
I am new to shell scripting.I tried adding an entry to the path variable like below
export PATH=$PATH:/opt/xxx/bin
But am getting an error invalid identifier /opt/xxx/bin
Can someone tell me the error above and correct me .
Thanks and Regards,
Padmini (2 Replies)
Discussion started by: padmisri
2 Replies
9. Shell Programming and Scripting
Hi
I am trying to write a function that needs to be able to assign the last run shell command to a variable. The actual command string itself not the exit code of the command.
I am using the bash command recall ability to do this as follows:
alias pb='ps | grep ash' ... (3 Replies)
Discussion started by: Moxy
3 Replies
10. Shell Programming and Scripting
I want to just run this command from a bash script and
put it in variable.
date '+%M'
gives the minutes in solaris. (2 Replies)
Discussion started by: photon
2 Replies