You say MEF2C is in the gene list, but it is not present in the file you provided???
What operating system are you using? The standards don't specify the meaning of a grep -w option. Note also that by some definitions of "word" the line:
does not contain the word MEF2BNB-MEF2B, but does the three words MEF2B (twice), MEF2BNB (once), and SNV (once). Are you sure that grep -w is using the same definition of "word" that you are expecting?
Is there by any chance an empty line in your gene file?
Are the files you're processing UNIX text files? (Or, might they be DOS text files?)
This User Gave Thanks to Don Cragun For This Post:
Please answer the questions in Don Cragun's post#4 applying utmost care, esp. checking for the empty line. If that doesn't help, reduce the gene file to a single line representing a single gene and rotate those until we can find some evidence for the "strange" behaviour.
Hi Guys,
I am regular Solaris user. I came across a weird problem that puzzled me. Hope you guys can help. I found that process's state(command & arguments) in two different variants of ps command is different. Can anyone explain how is this possible?
bash-3.2$ ps -eLo pid,s,comm,args |... (2 Replies)
Hello folks,
I've found an HP-UX server with a rare 'ls -l' output. Please see the attached file.
Anybody knows how can I change the output to not have this extra tabulations?
Thanks in advance! (10 Replies)
Hello;
Am trying to correct the formatting of tail output over ssh.
Using the following code:
echo "" > $FILE
for BOX in $SERVERS
do
echo "Processing on $BOX" |tee -a $FILE
echo "===============================" >> $FILE
sudo ssh $BOX 'TERMINAL="vt100" /usr/bin/sh -s' <... (2 Replies)
This script is giving weird output
#!/bin/bash
NETPATH=(`/bin/traceroute -n 4.2.2.2 | awk '{print $2}'`)
for i in "${NETPATH}"
do
echo $i
done
The output:
to
11.11.11.1
1.1.1.1
99.111.208.2
traceroute_test.sh
traceroute_test.sh (7 Replies)
My script-
result=""
times()
{
echo "inside the times function"
result=8
echo "Inside function $result"
return $result
}
result=$(times)
echo "the value is "$?
echo "the value of result $result"
when I run I get this, why the value still remain 0.
$ ./func
the value is 0
the value... (5 Replies)
Hi,
Anyone knows why I can't display the contents of my directory and how to fix this?
http://i50.tinypic.com/4smfth.jpg
Thanks in advance for any advise.
Deanne
Double post. Continued here. (0 Replies)
hi all,
have a ksh script which connects to a database and runs a sql and dumps it to a '.csv' file. The problem is the result is in multiple rows with long spaces in between when it should be just a single line and this screws up the format in the '.csv' file.
script is :
#!/bin/ksh... (1 Reply)
#!/bin/bash
INPUT=$1
if
then
INPUT=0$1
TRACKNUMBER=$INPUT
fi
TRACKNUMBER=$INPUT
echo "Track Number:" $TRACKNUMBER
if
then
echo "File Does Not Exist!: split-track"${TRACKNUMBER}".wav"
exit 0
fi
CUEFILE="$2" (6 Replies)
I met a problem in using grep -P.
There is a text file, temp.txt, whose content is:
dddd
abc
I ran the command:
grep -P "\s*abc" temp.txt
The result I expected is:
abc
But, the actual result is:
dddd
abc
Could anyone tell me what is wrong?
Thanks. (2 Replies)
just setup a new system today - 9117 570, using HMC for console but not partitioned.
I installed this system twice. the first time it started off as 5300-00, then updated to ML03. before the update, I believe I mirrored the rootvg, and then altered the bootlist, at that point, the display was... (4 Replies)